RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-233	ENST00000612121	PCDH7	O60245	1069 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	LYZL6	O75951	148 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	YES1	P07947	543 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	COL6A2	P12110	1019 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	ME2	P23368	584 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	NAB1	Q13506	487 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	SQLE	Q14534	574 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	HEPACAM	Q14CZ8	416 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	STK11	Q15831	433 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	TMEM107	Q6UX40	140 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121		Q6ZT83	130 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	TRABD2A	Q86V40	505 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	MEX3D	Q86XN8	651 aa	Known RBP	13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	LILRA2	Q8N149	483 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	OR2L13	Q8N349	312 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	MUC15	Q8N387	334 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	ACTRT2	Q8TDY3	377 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	FBF1	Q8TES7	1133 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	C16orf78	Q8WTQ4	265 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	CPNE4	Q96A23	557 aa	Predicted RBP	13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	MSI2	Q96DH6	328 aa	Known RBP	13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	REXO5	Q96IC2	774 aa	Known RBP	13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	BBS4	Q96RK4	519 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	KLHDC3	Q9BQ90	382 aa		13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	EML4	Q9HC35	981 aa	Known RBP	13.69	□□□□□ -0.22
LTBP4-233	ENST00000612121	TG	P01266	2768 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	GNG14	A0A1W2PPG7	69 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	GXYLT2	A0PJZ3	443 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	VWC2L	B2RUY7	222 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	KCNAB3	O43448	404 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	PRKD3	O94806	890 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	SLITRK5	O94991	958 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	OTC	P00480	354 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	JUN	P05412	331 aa	Known RBP	13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	RPS17	P08708	135 aa	Known RBP	13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	CSF3	P09919	207 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	HSD3B1	P14060	373 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	CHN1	P15882	459 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	HNF1A	P20823	631 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	HSD3B2	P26439	372 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	CFP	P27918	469 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	STX2	P32856	288 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	SFTPD	P35247	375 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	MANF	P55145	182 aa	Known RBP	13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	MRPS25	P82663	173 aa	Known RBP	13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	SLC18A2	Q05940	514 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	ZNHIT3	Q15649	155 aa	Predicted RBP	13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	TIMM23B	Q5SRD1	257 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	FCRLA	Q7L513	359 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	FBXL14	Q8N1E6	418 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	OR4C3	Q8NH37	302 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	MUCL1	Q96DR8	90 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	C1orf159	Q96HA4	380 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	SHCBP1L	Q9BZQ2	653 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	TIGAR	Q9NQ88	270 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	RNF14	Q9UBS8	474 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	PRSS50	Q9UI38	385 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	TMCO1	Q9UM00	188 aa		13.68	□□□□□ -0.22
LTBP4-233	ENST00000612121	CCDC188	H7C350	402 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	MANBA	O00462	879 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	EFNA2	O43921	213 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	PGM3	O95394	542 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	OXSR1	O95747	527 aa	Predicted RBP	13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	NGFR	P08138	427 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	TSPAN8	P19075	237 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	GABRA3	P34903	492 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	OR3A2	P47893	321 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	ZNF41	P51814	821 aa	Predicted RBP	13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	NCBP2	P52298	156 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	EFNA4	P52798	201 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	CDH13	P55290	713 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	SPOCK1	Q08629	439 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	B3GLCT	Q6Y288	498 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	SSX8	Q7RTT4	187 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	RFLNB	Q8N5W9	214 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	CDYL2	Q8N8U2	506 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	ZNF483	Q8TF39	744 aa	Predicted RBP	13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	PIK3R3	Q92569	461 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	APIP	Q96GX9	242 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	PRR14	Q9BWN1	585 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	ADAM19	Q9H013	955 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	DPH5	Q9H2P9	285 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	C3orf14	Q9HBI5	128 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	HHATL	Q9HCP6	504 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	DDX18	Q9NVP1	670 aa	Known RBP	13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	ING1	Q9UK53	422 aa	Predicted RBP	13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	MGAT4B	Q9UQ53	548 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	PKD1L1	Q8TDX9	2849 aa		13.67	□□□□□ -0.22
LTBP4-233	ENST00000612121	TCF21	O43680	179 aa		13.66	□□□□□ -0.22
LTBP4-233	ENST00000612121	LY6H	O94772	140 aa		13.66	□□□□□ -0.22
LTBP4-233	ENST00000612121	OR4F21	O95013	312 aa		13.66	□□□□□ -0.22
LTBP4-233	ENST00000612121	KCNH1	O95259	989 aa		13.66	□□□□□ -0.22
LTBP4-233	ENST00000612121	RBP1	P09455	135 aa		13.66	□□□□□ -0.22
LTBP4-233	ENST00000612121	LINGO3	P0C6S8	592 aa		13.66	□□□□□ -0.22
LTBP4-233	ENST00000612121	DDC	P20711	480 aa		13.66	□□□□□ -0.22
LTBP4-233	ENST00000612121	IGHV1-2	P23083	117 aa		13.66	□□□□□ -0.22
LTBP4-233	ENST00000612121	EDNRA	P25101	427 aa		13.66	□□□□□ -0.22
LTBP4-233	ENST00000612121	TYK2	P29597	1187 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms