RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 STARD5Q9NSY2 213 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 LRRN3E7EW58 273 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 TACSTD2P09758 323 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 CISD3P0C7P0 127 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 CPMP14384 443 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 IGFBP4P22692 258 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 GRPRP30550 384 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 KIR2DS3Q14952 304 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 HSD17B12Q53GQ0 312 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 ZMAT1Q5H9K5 638 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 ARHGAP11AQ6P4F7 1023 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 IL20RBQ6UXL0 311 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 GDF7Q7Z4P5 450 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 TM9SF4Q92544 642 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 COMMD4Q9H0A8 199 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 LRRN3Q9H3W5 708 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 GPN1Q9HCN4 374 aaPredicted RBP8.12□□□□□ -1.11
LIG4-204ENST00000611712 HCN3Q9P1Z3 774 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 MUTYHQ9UIF7 546 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 PCDHGA4Q9Y5G9 962 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 NPC1O15118 1278 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 POLR1CO15160 346 aaPredicted RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 F3P13726 295 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SSX1Q16384 188 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 TP53I3Q53FA7 332 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 BCL2L15Q5TBC7 163 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 MBOAT2Q6ZWT7 520 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 MEPCEQ7L2J0 689 aaKnown RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 POMGNT2Q8NAT1 580 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 OR13C2Q8NGS9 318 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 TRMT10AQ8TBZ6 339 aaKnown RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 SLC25A36Q96CQ1 311 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SGTBQ96EQ0 304 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 ZNF559Q9BR84 538 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 CACNG6Q9BXT2 260 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SLC6A17Q9H1V8 727 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SIDT1Q9NXL6 827 aaKnown RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 A4GNTQ9UNA3 340 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 RASD1Q9Y272 281 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 TMEM129A0AVI4 362 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 NOTOA8MTQ0 251 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 PIP5K1CO60331 668 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SOX30O94993 753 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 FPR3P25089 353 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 PRKAR1BP31321 381 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SNTB2Q13425 540 aaKnown RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 DECR1Q16698 335 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 MFSD12Q6NUT3 480 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 KIAA1211LQ6NV74 962 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 C1orf94Q6P1W5 598 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SLITRK4Q8IW52 837 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 LRRC56Q8IYG6 542 aaPredicted RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 UCN3Q969E3 161 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 DNAJA3Q96EY1 480 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 MMABQ96EY8 250 aaPredicted RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 C4orf36Q96KX1 117 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 UBQLN3Q9H347 655 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 FGF22Q9HCT0 170 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 BCL2L10Q9HD36 194 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 PRTFDC1Q9NRG1 225 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 CLDND1Q9NY35 253 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 DOCK4Q8N1I0 1966 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 TMEM150CB9EJG8 249 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 GCM2O75603 506 aaPredicted RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 RPS5P46782 204 aaKnown RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 TNFRSF17Q02223 184 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SF3A2Q15428 464 aaKnown RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 CCDC190Q86UF4 302 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 FBXL6Q8N531 539 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 KIAA1958Q8N8K9 716 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 FBLIM1Q8WUP2 373 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 RIT1Q92963 219 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 PEX11GQ96HA9 241 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 FUZQ9BT04 418 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 CHST8Q9H2A9 424 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 EXO1Q9UQ84 846 aaKnown RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 NEUROG3Q9Y4Z2 214 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 IQCMA0A1B0GVH7 501 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SGK494L7N484 410 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SCDO00767 359 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 FFAR1O14842 300 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 RDH16O75452 317 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 KCNK2O95069 426 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 PAPLNO95428 1278 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 RENP00797 406 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 FCER2P06734 321 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 RNH1P13489 461 aaKnown RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 HNRNPA2B1P22626 353 aaKnown RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 IL12BP29460 328 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 PITPNBP48739 271 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 EIF2B5Q13144 721 aaKnown RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 BAK1Q16611 211 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 ACSM3Q53FZ2 586 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 NXNL2Q5VZ03 156 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 C12orf73Q69YU5 71 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 ZNF527Q8NB42 609 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SDR9C7Q8NEX9 313 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 THEM6Q8WUY1 208 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 SMPDL3BQ92485 455 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 CNN2Q99439 309 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms