RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 FRKP42685 505 aaPredicted RBP11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 PTH2RP49190 550 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 ZNF41P51814 821 aaPredicted RBP11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 DUSP5Q16690 384 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 RFTN2Q52LD8 501 aaPredicted RBP11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 HBMQ6B0K9 141 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 MFSD12Q6NUT3 480 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 BEND4Q6ZU67 534 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 OR2V1Q8NHB1 315 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 POC1BQ8TC44 478 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 ACTRT2Q8TDY3 377 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 OSTF1Q92882 214 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 ZBTB8AQ96BR9 441 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 OTUB1Q96FW1 271 aaPredicted RBP11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 FCRL1Q96LA6 429 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 RNF145Q96MT1 663 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 CCT7Q99832 543 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 KLHDC3Q9BQ90 382 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 GSX2Q9BZM3 304 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 TUBB1Q9H4B7 451 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 TMEM185BQ9H7F4 350 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 FANCFQ9NPI8 374 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 UBQLN4Q9NRR5 601 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 GLRX2Q9NS18 164 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 MED17Q9NVC6 651 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 JMJD1CQ15652 2540 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 CSPG4Q6UVK1 2322 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 C7orf72A4D263 438 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 COPEO14579 308 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 ALOX5P09917 674 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 PCSK6P29122 969 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 CARD18P57730 90 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 RPL38P63173 70 aaKnown RBP11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 PDE7AQ13946 482 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 PLPPR5Q32ZL2 321 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 PDSS1Q5T2R2 415 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 CCNJQ5T5M9 372 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 LIPMQ5VYY2 423 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 GTF2IRD2BQ6EKJ0 949 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 ZCCHC12Q6PEW1 402 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 ZNF704Q6ZNC4 412 aaPredicted RBP11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 ESPNLQ6ZVH7 1005 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 GTF2IRD2Q86UP8 949 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 WFDC8Q8IUA0 241 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 C10orf107Q8IVU9 208 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 GSPT2Q8IYD1 628 aaKnown RBP11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 COX18Q8N8Q8 333 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 B4GALNT2Q8NHY0 566 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 TMEM171Q8WVE6 324 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 IGFBPL1Q8WX77 278 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 ROBO4Q8WZ75 1007 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 PLPPR2Q96GM1 343 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 MS4A4EQ96PG1 132 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 GATA5Q9BWX5 397 aaPredicted RBP11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 C12orf49Q9H741 205 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 ACSS1Q9NUB1 689 aaPredicted RBP11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 USF3Q68DE3 2245 aa11.96□□□□□ -0.49
POLR2J3-219ENST00000608621 TLN2Q9Y4G6 2542 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 A0A1W2PQD3 144 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 SMIM23A6NLE4 172 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 SCDO00767 359 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 EFNA2O43921 213 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 CNOT4O95628 575 aaKnown RBP11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 KRT4P19013 534 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 ME2P23368 584 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 LCN1P31025 176 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 SERPINB4P48594 390 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 PRIM2P49643 509 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 POU6F2P78424 691 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 CD226Q15762 336 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 GALNTL6Q49A17 601 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 EXOSC6Q5RKV6 272 aaKnown RBP11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 ALKBH2Q6NS38 261 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 LRIG3Q6UXM1 1119 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 STK32CQ86UX6 486 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 TRABD2AQ86V40 505 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 PRIMA1Q86XR5 153 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 MISPQ8IVT2 679 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 LILRA2Q8N149 483 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 KIF18AQ8NI77 898 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 UBLCP1Q8WVY7 318 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 JADE3Q92613 823 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 MTERF3Q96E29 417 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 FAM120BQ96EK7 910 aaKnown RBP11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 CHMP6Q96FZ7 201 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 KLHL15Q96M94 604 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 BTBD2Q9BX70 525 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 ACTR6Q9GZN1 396 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 GPR52Q9Y2T5 361 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 DNAJC15Q9Y5T4 150 aa11.95□□□□□ -0.5
POLR2J3-219ENST00000608621 KIF2AO00139 706 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-219ENST00000608621 LSM1O15116 133 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-219ENST00000608621 TRIM13O60858 407 aa11.94□□□□□ -0.5
POLR2J3-219ENST00000608621 NTN1O95631 604 aa11.94□□□□□ -0.5
POLR2J3-219ENST00000608621 CHEK2O96017 543 aa11.94□□□□□ -0.5
POLR2J3-219ENST00000608621 HMGN2P05204 90 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-219ENST00000608621 TUBBP07437 444 aa11.94□□□□□ -0.5
POLR2J3-219ENST00000608621 LINGO3P0C6S8 592 aa11.94□□□□□ -0.5
POLR2J3-219ENST00000608621 NEFHP12036 1026 aa11.94□□□□□ -0.5
POLR2J3-219ENST00000608621 BCKDHAP12694 445 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms