RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 A0A1W2PP18 115 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 CD8B2A6NJW9 211 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 B4DXG7 233 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 CLDN14O95500 239 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 CLDN1O95832 211 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 GLI4P10075 376 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 ZNF708P17019 499 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 HK1P19367 917 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 NCF2P19878 526 aaPredicted RBP12.94□□□□□ -0.34
HDDC2-206ENST00000608461 PPIBP23284 216 aaKnown RBP12.94□□□□□ -0.34
HDDC2-206ENST00000608461 CHRNB4P30926 498 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 TIMP3P35625 211 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 MDH1P40925 334 aaKnown RBP12.94□□□□□ -0.34
HDDC2-206ENST00000608461 EIF1P41567 113 aaKnown RBP12.94□□□□□ -0.34
HDDC2-206ENST00000608461 LHX2P50458 406 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 P2RX1P51575 399 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 ZNF41P51814 821 aaPredicted RBP12.94□□□□□ -0.34
HDDC2-206ENST00000608461 HPCAP84074 193 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 GUCY1A3Q02108 690 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 PMPCAQ10713 525 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 GNA13Q14344 377 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 C6orf10Q5SRN2 563 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 LRIF1Q5T3J3 769 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 RIPPLY2Q5TAB7 128 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 NSUN5P2Q63ZY6 315 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 TNFAIP8L2Q6P589 184 aaPredicted RBP12.94□□□□□ -0.34
HDDC2-206ENST00000608461 MARVELD2Q8N4S9 558 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 B4GALNT2Q8NHY0 566 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 PHOSPHO1Q8TCT1 267 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 CA5BP1Q8WTZ4 195 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 VPS33AQ96AX1 596 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 ALKBH4Q9NXW9 302 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 CALML5Q9NZT1 146 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 TNFRSF10DQ9UBN6 386 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 CAMK2AQ9UQM7 478 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 WDR45Q9Y484 360 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 AP4B1Q9Y6B7 739 aa12.94□□□□□ -0.34
HDDC2-206ENST00000608461 SPTBN1Q01082 2364 aaKnown RBP12.93□□□□□ -0.34
HDDC2-206ENST00000608461 SPTAN1Q13813 2472 aaKnown RBP12.93□□□□□ -0.34
HDDC2-206ENST00000608461 SERINC4A6NH21 518 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 HSPB2A8KAH6 182 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 GTPBP1O00178 669 aaKnown RBP12.93□□□□□ -0.34
HDDC2-206ENST00000608461 ZNF264O43296 627 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 HCRTR2O43614 444 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 KIAA0513O60268 411 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 FCMRO60667 390 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 UGT2B17O75795 530 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 GSNP06396 782 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 VIMP08670 466 aaKnown RBP12.93□□□□□ -0.34
HDDC2-206ENST00000608461 ADH6P28332 368 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 NUP107P57740 925 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 B3GALT5-AS1P59052 145 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 FADDQ13158 208 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 GPR68Q15743 365 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 CD226Q15762 336 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 HSPB2Q16082 182 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 TMEM44Q2T9K0 475 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 ACSF3Q4G176 576 aaPredicted RBP12.93□□□□□ -0.34
HDDC2-206ENST00000608461 AGKQ53H12 422 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 RAET1LQ5VY80 246 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 TYW3Q6IPR3 259 aaKnown RBP12.93□□□□□ -0.34
HDDC2-206ENST00000608461 LRRC74BQ6ZQY2 392 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 ZNF619Q8N2I2 560 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 GTPBP8Q8N3Z3 284 aaPredicted RBP12.93□□□□□ -0.34
HDDC2-206ENST00000608461 LILRB4Q8NHJ6 448 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 RFWD2Q8NHY2 731 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 RAB8BQ92930 207 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 PAIP1Q9H074 479 aaKnown RBP12.93□□□□□ -0.34
HDDC2-206ENST00000608461 ZNF385DQ9H6B1 395 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 MTHFD2LQ9H903 347 aaPredicted RBP12.93□□□□□ -0.34
HDDC2-206ENST00000608461 SLC52A3Q9NQ40 469 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 FGFR1OP2Q9NVK5 253 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 ICAM5Q9UMF0 924 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 CORO2BQ9UQ03 480 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 SLC35A3Q9Y2D2 325 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 PCDHB14Q9Y5E9 798 aa12.93□□□□□ -0.34
HDDC2-206ENST00000608461 ARHGAP21Q5T5U3 1957 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 OR2M5A3KFT3 312 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 TMEM247A6NEH6 219 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 CLIC1O00299 241 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 IL2RAP01589 272 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 UBL4AP11441 157 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 ADSLP30566 484 aaPredicted RBP12.92□□□□□ -0.34
HDDC2-206ENST00000608461 ARFIP2P53365 341 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 MVDP53602 400 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 CLDN18P56856 261 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 EEF1A1P68104 462 aaKnown RBP12.92□□□□□ -0.34
HDDC2-206ENST00000608461 ZSWIM7Q19AV6 140 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 GPAT3Q53EU6 434 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.92□□□□□ -0.34
HDDC2-206ENST00000608461 PDZK1Q5T2W1 519 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 EEF1A1P5Q5VTE0 462 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 FRRS1Q6ZNA5 592 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 EIF3MQ7L2H7 374 aaKnown RBP12.92□□□□□ -0.34
HDDC2-206ENST00000608461 ADGRE4PQ86SQ3 457 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 CMIPQ8IY22 773 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 MEIOBQ8N635 442 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 OR10Q1Q8NGQ4 319 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 SDCCAG3Q96C92 435 aa12.92□□□□□ -0.34
HDDC2-206ENST00000608461 ARSGQ96EG1 525 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms