RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 ORAI3Q9BRQ5 295 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 SEC61A2Q9H9S3 476 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 EXOSC4Q9NPD3 245 aaKnown RBP4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 MYOTQ9UBF9 498 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 TP53TG5Q9Y2B4 290 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 ERVH48-1M5A8F1 160 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 KPNA4O00629 521 aaPredicted RBP4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 BCKDKO14874 412 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 PGRMC2O15173 223 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 CBFA2T3O75081 653 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 MRPL33O75394 65 aaKnown RBP4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 UTS2O95399 124 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 APOA1P02647 267 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 CAPGP40121 348 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 DCTP40126 519 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 CARD18P57730 90 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 B3GNTL1Q67FW5 361 aaPredicted RBP4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 ARL9Q6T311 187 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 ZNF574Q6ZN55 896 aaPredicted RBP4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 MAMDC2Q7Z304 686 aaPredicted RBP4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 MARVELD2Q8N4S9 558 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 MED18Q9BUE0 208 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 PIGUQ9H490 435 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 EVA1AQ9H8M9 152 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 PLGRKTQ9HBL7 147 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 MMP25Q9NPA2 562 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 BTNL2Q9UIR0 455 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 TMEM5Q9Y2B1 443 aa4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 SAMHD1Q9Y3Z3 626 aaKnown RBP4.78□□□□□ -1.64
SCARNA15-201ENST00000607520 SPTBP11277 2137 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 PDCD11Q14690 1871 aaKnown RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 FAM90A27PA6NNH2 459 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 RNF13O43567 381 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 CNOT3O75175 753 aaKnown RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 HOXD4P09016 255 aaPredicted RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 RAP2AP10114 183 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 CNR1P21554 472 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 GSSP48637 474 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 DNASE1L1P49184 302 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ST13P50502 369 aaKnown RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 PNLIPRP2P54317 469 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 RPS26P62854 115 aaKnown RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ZIC1Q15915 447 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 EIF2S3LQ2VIR3 472 aaKnown RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 PRAMEF8Q5VWM4 474 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 PRAMEF7Q5VXH5 474 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 SLC2A7Q6PXP3 512 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 MAVSQ7Z434 540 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 THAP5Q7Z6K1 395 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 SLC15A3Q8IY34 581 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 DPP10Q8N608 796 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 OR52N2Q8NGI0 321 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 SLC25A43Q8WUT9 341 aaPredicted RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 DNAJA4Q8WW22 397 aaPredicted RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 CDS1Q92903 461 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ISL2Q96A47 359 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 TP53INP1Q96A56 240 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 HIST1H2AAQ96QV6 131 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ZNF559Q9BR84 538 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 PROCRQ9UNN8 238 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 GMPPBQ9Y5P6 360 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 J3QKU1 62 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ADAMDEC1O15204 470 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 DENRO43583 198 aaKnown RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ASNA1O43681 348 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 NPPAP01160 153 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ADORA3P0DMS8 318 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 PNMTP11086 282 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 LCN1P31025 176 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 PTGER1P34995 402 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 SOX3P41225 446 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 EFNA3P52797 238 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 TLE3Q04726 772 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 CLN3Q13286 438 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 DGCR6Q14129 220 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 LTB4RQ15722 352 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 TBR1Q16650 682 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ATP1A1-AS1Q5TC04 95 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 HBMQ6B0K9 141 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 HIPK1Q86Z02 1210 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ANKRD53Q8N9V6 530 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 MOSPD2Q8NHP6 518 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 SNX33Q8WV41 574 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 GEMIN6Q8WXD5 167 aaKnown RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 CIDECQ96AQ7 238 aaPredicted RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ELP4Q96EB1 424 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 HS6ST2Q96MM7 605 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 RBM4BQ9BQ04 359 aaKnown RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 NUDT9Q9BW91 350 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 RBM4Q9BWF3 364 aaKnown RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 WWTR1Q9GZV5 400 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ERRFI1Q9UJM3 462 aaPredicted RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 ACSL6Q9UKU0 697 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 C19orf53Q9UNZ5 99 aaPredicted RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 CARD8Q9Y2G2 431 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 MAGED1Q9Y5V3 778 aaPredicted RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 PTGDR2Q9Y5Y4 395 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 COL4A4P53420 1690 aaPredicted RBP4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 OR2W5A6NFC9 320 aa4.77□□□□□ -1.65
SCARNA15-201ENST00000607520 RIIAD1A6NNX1 92 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms