RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 FAM53BQ14153 422 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 INAQ16352 499 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 SMN1Q16637 294 aaKnown RBP9.79□□□□□ -0.84
LINC01001-203ENST00000607448 MPEG1Q2M385 716 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 EXOC3L2Q2M3D2 409 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 REEP3Q6NUK4 255 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 USP43Q70EL4 1123 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 RNF130Q86XS8 419 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 EGFL6Q8IUX8 553 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 MFSD4AQ8N468 514 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 ANKRD53Q8N9V6 530 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 KBTBD8Q8NFY9 601 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 RNF217Q8TC41 542 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 GGHQ92820 318 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 AIF1LQ9BQI0 150 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 ZNF160Q9HCG1 818 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 NEUROD4Q9HD90 331 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 ATP13A2Q9NQ11 1180 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 IMPAD1Q9NX62 359 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 CNOT2Q9NZN8 540 aaKnown RBP9.79□□□□□ -0.84
LINC01001-203ENST00000607448 HCN3Q9P1Z3 774 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 MAP4K5Q9Y4K4 846 aa9.79□□□□□ -0.84
LINC01001-203ENST00000607448 ISPDA4D126 451 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 ZNF860A6NHJ4 632 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 ANKDD1BA6NHY2 528 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 SAGE2PA6NJ88 616 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 TTLL8A6PVC2 850 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 OR1F1O43749 312 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 AIREO43918 545 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 MAN1A2O60476 641 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 RDH16O75452 317 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 KLHL18O94889 574 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 GADD45GO95257 159 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 NSA2O95478 260 aaKnown RBP9.78□□□□□ -0.84
LINC01001-203ENST00000607448 OXSR1O95747 527 aaPredicted RBP9.78□□□□□ -0.84
LINC01001-203ENST00000607448 LCKP06239 509 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 IL3P08700 152 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 IMPDH2P12268 514 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 GABRB1P18505 474 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 DDCP20711 480 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 CBLP22681 906 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 CLK1P49759 484 aaKnown RBP9.78□□□□□ -0.84
LINC01001-203ENST00000607448 SRSF1Q07955 248 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC01001-203ENST00000607448 AIMP2Q13155 320 aaKnown RBP9.78□□□□□ -0.84
LINC01001-203ENST00000607448 IRF3Q14653 427 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 TIGD6Q17RP2 521 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 SAXO2Q658L1 398 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 ZNF367Q7RTV3 350 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 SLC46A3Q7Z3Q1 461 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 ASPGQ86U10 573 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 LACC1Q8IV20 430 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 SLC44A2Q8IWA5 706 aaPredicted RBP9.78□□□□□ -0.84
LINC01001-203ENST00000607448 MFSD9Q8NBP5 474 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 OR5T3Q8NGG3 340 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 PSMA8Q8TAA3 256 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 RASSF5Q8WWW0 418 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 CIDECQ96AQ7 238 aaPredicted RBP9.78□□□□□ -0.84
LINC01001-203ENST00000607448 NACC2Q96BF6 587 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 NEURL3Q96EH8 262 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 SARGQ9BW04 601 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 RBCK1Q9BYM8 510 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 TGIF2Q9GZN2 237 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 SLIRPQ9GZT3 109 aaKnown RBP9.78□□□□□ -0.84
LINC01001-203ENST00000607448 AICDAQ9GZX7 198 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 RACGAP1Q9H0H5 632 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 DCSTAMPQ9H295 470 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 ACER3Q9NUN7 267 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 ZNF226Q9NYT6 803 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 CCDC59Q9P031 241 aaKnown RBP9.78□□□□□ -0.84
LINC01001-203ENST00000607448 AASSQ9UDR5 926 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 ADAM29Q9UKF5 820 aa9.78□□□□□ -0.84
LINC01001-203ENST00000607448 TRBC2A0A5B9 178 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 C5orf58C9J3I9 102 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 NDUFS4O43181 175 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 ADAP00813 363 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 OPN1SWP03999 348 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 PIPP12273 146 aaPredicted RBP9.77□□□□□ -0.85
LINC01001-203ENST00000607448 BMP4P12644 408 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 CCR8P51685 355 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 PPP5CP53041 499 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 EMP2P54851 167 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 SMIM11AP58511 58 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 NCS1P62166 190 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 TRA2BP62995 288 aaKnown RBP9.77□□□□□ -0.85
LINC01001-203ENST00000607448 HYAL2Q12891 473 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 HEPACAMQ14CZ8 416 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 TIMM50Q3ZCQ8 353 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 PLEKHN1Q494U1 663 aaPredicted RBP9.77□□□□□ -0.85
LINC01001-203ENST00000607448 DEPDC1Q5TB30 811 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 KHDRBS2Q5VWX1 349 aaKnown RBP9.77□□□□□ -0.85
LINC01001-203ENST00000607448 LANCL3Q6ZV70 420 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 ZBTB46Q86UZ6 589 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 TAGAPQ8N103 731 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 STX19Q8N4C7 294 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 CAMKVQ8NCB2 501 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 MCFD2Q8NI22 146 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 CPT1CQ8TCG5 803 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 THOC3Q96J01 351 aaKnown RBP9.77□□□□□ -0.85
LINC01001-203ENST00000607448 MS4A8Q9BY19 250 aa9.77□□□□□ -0.85
LINC01001-203ENST00000607448 SLC6A16Q9GZN6 736 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms