RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 NEDD8Q15843 81 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 KCNMB1Q16558 191 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 VWC2Q2TAL6 325 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 CRB2Q5IJ48 1285 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 EOGTQ5NDL2 527 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 LRIF1Q5T3J3 769 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 PRSS55Q6UWB4 352 aaPredicted RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 DLEU7Q6UYE1 221 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 ASCL4Q6XD76 172 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC35D2Q76EJ3 337 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 ALYREFQ86V81 257 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC13A5Q86YT5 568 aaPredicted RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 GTPBP8Q8N3Z3 284 aaPredicted RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 C12orf45Q8N5I9 185 aaPredicted RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 PROKR2Q8NFJ6 384 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 ASB15Q8WXK1 588 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 CNOT9Q92600 299 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SIGLEC10Q96LC7 697 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 HYLS1Q96M11 299 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TAAR1Q96RJ0 339 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 LGMNQ99538 433 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 WRAP53Q9BUR4 548 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 C1QTNF1Q9BXJ1 281 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 KLHL31Q9H511 634 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 CSNK1G1Q9HCP0 422 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC6A13Q9NSD5 602 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 LYARQ9NX58 379 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 XPR1Q9UBH6 696 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 TBL2Q9Y4P3 447 aaKnown RBP4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 PEX16Q9Y5Y5 336 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 URGCP-MRPS24S4R325 110 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 CHD5Q8TDI0 1954 aa4.68□□□□□ -1.66
SPTBN1-206ENST00000602898 GAGE10A6NGK3 116 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 M0QYV0 167 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 P2RY10O00398 339 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 B4GALT5O43286 388 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 KDELR3O43731 214 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 FCMRO60667 390 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 GABARAPO95166 117 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 RLN2P04090 185 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 PCCAP05165 728 aaPredicted RBP4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 CHRNGP07510 517 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 SYPP08247 313 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 ANXA4P09525 319 aaPredicted RBP4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 NR2F6P10588 404 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 ADH5P11766 374 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 FCER1AP12319 257 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 PPP3CBP16298 524 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 NELFEP18615 380 aaKnown RBP4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 CA4P22748 312 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 ACADLP28330 430 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 HSD11B1P28845 292 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 RPA3P35244 121 aaPredicted RBP4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 RFC3P40938 356 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 OMPP47874 163 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 RBP2P50120 134 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 HTR6P50406 440 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 MAZP56270 477 aaKnown RBP4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 UBE2KP61086 200 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC25A3Q00325 362 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 SERTAD2Q14140 314 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 KRT33BQ14525 404 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 TAF1AQ15573 450 aaPredicted RBP4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC1A5Q15758 541 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 ATP13A5Q4VNC0 1218 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 IRAK1BP1Q5VVH5 260 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 NXNL2Q5VZ03 156 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 VASNQ6EMK4 673 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 PRSS57Q6UWY2 283 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 SIGLEC15Q6ZMC9 328 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC39A5Q6ZMH5 540 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 RNF144BQ7Z419 303 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 ADHFE1Q8IWW8 467 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 STX19Q8N4C7 294 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 GPRC5AQ8NFJ5 357 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 BPIFB6Q8NFQ5 453 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 SHKBP1Q8TBC3 707 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 ASB11Q8WXH4 323 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 ST8SIA1Q92185 356 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 CREB3L1Q96BA8 519 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 BIRC7Q96CA5 298 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 CCDC124Q96CT7 223 aaKnown RBP4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 R3HDM4Q96D70 268 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 WBP1Q96G27 269 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 BOD1Q96IK1 185 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 ZBTB45Q96K62 511 aaPredicted RBP4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 ZSWIM1Q9BR11 485 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 IFT27Q9BW83 186 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 ANGPTL4Q9BY76 406 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 TOLLIPQ9H0E2 274 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 SEMA6CQ9H3T2 930 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 SMOC2Q9H3U7 446 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 GSX1Q9H4S2 264 aaPredicted RBP4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 ACTL8Q9H568 366 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 LYRM4Q9HD34 91 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 PDGFCQ9NRA1 345 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 COPS7AQ9UBW8 275 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 SSR3Q9UNL2 185 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 HSPB11Q9Y547 144 aa4.67□□□□□ -1.66
SPTBN1-206ENST00000602898 A3GALT2U3KPV4 340 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms