RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 TESQ9UGI8 421 aaKnown RBP16.56■□□□□ 0.24
VRK3-225ENST00000601912 NPFFR2Q9Y5X5 522 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 CNOT1A5YKK6 2376 aaKnown RBP16.56■□□□□ 0.24
VRK3-225ENST00000601912 OR6C70A6NIJ9 312 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 CPSF4LA6NMK7 179 aaKnown RBP16.56■□□□□ 0.24
VRK3-225ENST00000601912 WWP2O00308 870 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 TPST2O60704 377 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 FMO6PO60774 539 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 OXSR1O95747 527 aaPredicted RBP16.56■□□□□ 0.24
VRK3-225ENST00000601912 CSTAP01040 98 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 GKN3PP0CG01 181 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 CYP4B1P13584 511 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 ICAM2P13598 275 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 ANXA8P13928 327 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 IGFBP5P24593 272 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 ADH7P40394 386 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 HOXC5Q00444 222 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 MED21Q13503 144 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 EFR3AQ14156 821 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 NHSL2Q5HYW2 709 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 C6orf52Q5T4I8 152 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 ZNF550Q7Z398 422 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 PPP1R32Q7Z5V6 425 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 IL22RA1Q8N6P7 574 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 AMER2Q8N7J2 671 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 CNOT9Q92600 299 aaKnown RBP16.56■□□□□ 0.24
VRK3-225ENST00000601912 CTPS2Q9NRF8 586 aa16.56■□□□□ 0.24
VRK3-225ENST00000601912 ARRDC5A6NEK1 342 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 CDRT15L2A8MXV6 281 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.55■□□□□ 0.24
VRK3-225ENST00000601912 FAAHO00519 579 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 DLGAP1O14490 977 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 DENRO43583 198 aaKnown RBP16.55■□□□□ 0.24
VRK3-225ENST00000601912 GFRA3O60609 400 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 ICOSLGO75144 302 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 PPM1BO75688 479 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 OR5F1O95221 314 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 NGFRP08138 427 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 NAGAP17050 411 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 ENDOUP21128 410 aaKnown RBP16.55■□□□□ 0.24
VRK3-225ENST00000601912 ELAVL4P26378 380 aaKnown RBP16.55■□□□□ 0.24
VRK3-225ENST00000601912 ZNF136P52737 540 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 MERTKQ12866 999 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 ZNF440Q8IYI8 595 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 LINC00471Q8N535 108 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 DHRSXQ8N5I4 330 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 SLC22A8Q8TCC7 542 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 ADAMTS16Q8TE57 1224 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 ZNF559Q9BR84 538 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 ADI1Q9BV57 179 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 PRR14Q9BWN1 585 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 ANKRD19PQ9H560 264 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 ZBTB20Q9HC78 741 aaPredicted RBP16.55■□□□□ 0.24
VRK3-225ENST00000601912 ZNF160Q9HCG1 818 aa16.55■□□□□ 0.24
VRK3-225ENST00000601912 DNAJB12Q9NXW2 375 aaKnown RBP16.55■□□□□ 0.24
VRK3-225ENST00000601912 PTPRZ1P23471 2315 aaPredicted RBP16.55■□□□□ 0.24
VRK3-225ENST00000601912 TRBV4-1A0A0J9YWV2 114 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 TMEM200CA6NKL6 621 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 TERTO14746 1132 aaKnown RBP16.54■□□□□ 0.24
VRK3-225ENST00000601912 CYP7B1O75881 506 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 SNAP29O95721 258 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 UBTFL6P0CB48 400 aaPredicted RBP16.54■□□□□ 0.24
VRK3-225ENST00000601912 CDH2P19022 906 aaPredicted RBP16.54■□□□□ 0.24
VRK3-225ENST00000601912 TMED10P49755 219 aaKnown RBP16.54■□□□□ 0.24
VRK3-225ENST00000601912 DAPP51397 102 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 TRAM2Q15035 370 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 KDM4DQ6B0I6 523 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 FAHD1Q6P587 224 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 IGF2-ASQ6U949 168 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 RAB43Q86YS6 212 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 TOR1AIP2Q8NFQ8 470 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 SLC38A4Q969I6 547 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 FEVQ99581 238 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 PSD2Q9BQI7 771 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 ZNF556Q9HAH1 456 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 TMEM27Q9HBJ8 222 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 DLL3Q9NYJ7 618 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 FLRT3Q9NZU0 649 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 PCDHGA6Q9Y5G7 932 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 AHCTF1Q8WYP5 2266 aa16.54■□□□□ 0.24
VRK3-225ENST00000601912 LOC101059948A0A1B0GTJ6 334 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 GTPBP1O00178 669 aaKnown RBP16.53■□□□□ 0.24
VRK3-225ENST00000601912 UGT2B11O75310 529 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 BCAS1O75363 584 aaPredicted RBP16.53■□□□□ 0.24
VRK3-225ENST00000601912 HPP00738 406 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 PRG2P13727 222 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 F8A1P23610 371 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 IL1RL1Q01638 556 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 C16orf47Q6ZP98 133 aaPredicted RBP16.53■□□□□ 0.24
VRK3-225ENST00000601912 TSPYL5Q86VY4 417 aaPredicted RBP16.53■□□□□ 0.24
VRK3-225ENST00000601912 SLC5A8Q8N695 610 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 SLC15A4Q8N697 577 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 PHOSPHO1Q8TCT1 267 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 CYGBQ8WWM9 190 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 TFAP2CQ92754 450 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 NKD1Q969G9 470 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 SLC41A3Q96GZ6 507 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 TBL1XR1Q9BZK7 514 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 KRT84Q9NSB2 600 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 TMEFF2Q9UIK5 374 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms