RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	COL6A2	P12110	1019 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	PTAFR	P25105	342 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	CDC25B	P30305	580 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	NR4A2	P43354	598 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	ZNF83	P51522	516 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	PRR5	P85299	388 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	CHRNE	Q04844	493 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	GALNT1	Q10472	559 aa	Predicted RBP	10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	ZNF544	Q6NX49	715 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	KLHL7	Q8IXQ5	586 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	PTGR2	Q8N8N7	351 aa	Predicted RBP	10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	PRR14	Q9BWN1	585 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	GP6	Q9HCN6	339 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	SLC35C2	Q9NQQ7	365 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	NPAP1	Q9NZP6	1156 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	NFU1	Q9UMS0	254 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	SNX6	Q9UNH7	406 aa		10.85	□□□□□ -0.67
NUP62-223	ENST00000601665	PCNX3	Q9H6A9	2034 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665		A0A1W2PRB8	838 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	TCRBV9S1A1T	A0A576	114 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	C7orf72	A4D263	438 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	GJE1	A6NN92	205 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	ZNF814	B7Z6K7	855 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665		E7ESA3	106 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	PDYN	P01213	254 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	HPGD	P15428	266 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	EGR1	P18146	543 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	HEPACAM	Q14CZ8	416 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	GRAMD1B	Q3KR37	738 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	CCDC91	Q7Z6B0	441 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	SLC43A2	Q8N370	569 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	GATS	Q8NAP1	163 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	ZNF540	Q8NDQ6	660 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	GCDH	Q92947	438 aa	Predicted RBP	10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	INPP5K	Q9BT40	448 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	BRF2	Q9HAW0	419 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	MYNN	Q9NPC7	610 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	FARSB	Q9NSD9	589 aa	Known RBP	10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	MED17	Q9NVC6	651 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	DDX18	Q9NVP1	670 aa	Known RBP	10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	KLHL9	Q9P2J3	617 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	METRN	Q9UJH8	293 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	ATP23	Q9Y6H3	246 aa		10.84	□□□□□ -0.67
NUP62-223	ENST00000601665	IGHV4-61	A0A0C4DH41	118 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	CIB4	A0PJX0	185 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	OR5H1	A6NKK0	313 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	FAM159B	A6NKW6	160 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665		M0R1B8	84 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	JUN	P05412	331 aa	Known RBP	10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	CD40	P25942	277 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	GABRA3	P34903	492 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	EIF1	P41567	113 aa	Known RBP	10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	OR3A2	P47893	321 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	NCBP2	P52298	156 aa	Known RBP eCLIP	10.83	□□□□□ -0.68	8e-7	■□□□□ 8
NUP62-223	ENST00000601665	SPOCK1	Q08629	439 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	TRAF3	Q13114	568 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	PLPPR5	Q32ZL2	321 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	TMEM107	Q6UX40	140 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	C3orf62	Q6ZUJ4	267 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	TRABD2A	Q86V40	505 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	ZNF100	Q8IYN0	542 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	CENPL	Q8N0S6	344 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	MMGT1	Q8N4V1	131 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	OR4F6	Q8NGB9	312 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	OR52N5	Q8NH56	324 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	ACTRT2	Q8TDY3	377 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	ZFAND2B	Q8WV99	257 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	PHF21B	Q96EK2	531 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	SRXN1	Q9BYN0	137 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	FKRP	Q9H9S5	495 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	VPS29	Q9UBQ0	182 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	PRSS50	Q9UI38	385 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	TMEFF2	Q9UIK5	374 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	MCM8	Q9UJA3	840 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665	PKD1L1	Q8TDX9	2849 aa		10.83	□□□□□ -0.68
NUP62-223	ENST00000601665		A0A087WV62	115 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	LOC390937	A0A1W2PQ73	354 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	CCT8L1P	A6NM43	557 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	VWC2L	B2RUY7	222 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	PCDH7	O60245	1069 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	RAD51D	O75771	328 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	SLITRK5	O94991	958 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	CTAGE8	P0CG41	777 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	ZNF23	P17027	643 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	PSMA4	P25789	261 aa	Known RBP	10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	MANF	P55145	182 aa	Known RBP	10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	SLC18A2	Q05940	514 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	SCGB2A2	Q13296	93 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	GGTA1P	Q4G0N0	100 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	ARL13A	Q5H913	290 aa	Predicted RBP	10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	APOOL	Q6UXV4	268 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	CTAGE4	Q8IX94	777 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	UBE2J2	Q8N2K1	259 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	ATP6V1C2	Q8NEY4	427 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	CDC26	Q8NHZ8	85 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	FAM110B	Q8TC76	370 aa		10.82	□□□□□ -0.68
NUP62-223	ENST00000601665	GPR151	Q8TDV0	419 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms