RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 GZMMP51124 257 aa17.61■□□□□ 0.41
UPF1-209ENST00000600310 CDK6Q00534 326 aa17.61■□□□□ 0.41
UPF1-209ENST00000600310 RBBP4Q09028 425 aa17.61■□□□□ 0.41
UPF1-209ENST00000600310 ZNF630Q2M218 657 aaPredicted RBP17.61■□□□□ 0.41
UPF1-209ENST00000600310 C8orf82Q6P1X6 216 aaPredicted RBP17.61■□□□□ 0.41
UPF1-209ENST00000600310 ARPINQ7Z6K5 226 aa17.61■□□□□ 0.41
UPF1-209ENST00000600310 GHDCQ8N2G8 530 aa17.61■□□□□ 0.41
UPF1-209ENST00000600310 ZNF614Q8N883 585 aa17.61■□□□□ 0.41
UPF1-209ENST00000600310 OR4K17Q8NGC6 315 aa17.61■□□□□ 0.41
UPF1-209ENST00000600310 OR10A6Q8NH74 314 aa17.61■□□□□ 0.41
UPF1-209ENST00000600310 PHOSPHO1Q8TCT1 267 aa17.61■□□□□ 0.41
UPF1-209ENST00000600310 HOPXQ9BPY8 73 aaPredicted RBP17.61■□□□□ 0.41
UPF1-209ENST00000600310 QRSL1Q9H0R6 528 aaKnown RBP17.61■□□□□ 0.41
UPF1-209ENST00000600310 DSN1Q9H410 356 aa17.61■□□□□ 0.41
UPF1-209ENST00000600310 MED11Q9P086 117 aa17.61■□□□□ 0.41
UPF1-209ENST00000600310 ASH1LQ9NR48 2969 aaKnown RBP17.61■□□□□ 0.41
UPF1-209ENST00000600310 PGM3O95394 542 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 MSX1P28360 303 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 SRD5A2P31213 254 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 FGFBP1Q14512 234 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 CYP51A1Q16850 503 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 RPS26P11Q5JNZ5 115 aaPredicted RBP17.6■□□□□ 0.41
UPF1-209ENST00000600310 GFRALQ6UXV0 394 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 TRILQ7L0X0 811 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 ATCAYQ86WG3 371 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 CALHM3Q86XJ0 350 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 PTOV1Q86YD1 416 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 PEX5LQ8IYB4 626 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 C11orf65Q8NCR3 313 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 NFKBIDQ8NI38 313 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 BBS10Q8TAM1 723 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 ECSITQ9BQ95 431 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 SPATA9Q9BWV2 254 aa17.6■□□□□ 0.41
UPF1-209ENST00000600310 MRPS18CQ9Y3D5 142 aaKnown RBP17.6■□□□□ 0.41
UPF1-209ENST00000600310 SHANK1Q9Y566 2161 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 A0A1B0GVC2 190 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 C5orf58C9J3I9 102 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 CDC40O60508 579 aaKnown RBP eCLIP17.59■□□□□ 0.41
UPF1-209ENST00000600310 HCN1O60741 890 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 TRAPPC6AO75865 159 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 PDE9AO76083 593 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 DBIP07108 87 aaKnown RBP17.59■□□□□ 0.41
UPF1-209ENST00000600310 CPA2P48052 419 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 DSCR4P56555 118 aaPredicted RBP17.59■□□□□ 0.41
UPF1-209ENST00000600310 SCARB2Q14108 478 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 TOMM20Q15388 145 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 REEP3Q6NUK4 255 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 HMGN2P46Q86SG4 172 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 HIPK4Q8NE63 616 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 OR2B2Q9GZK3 357 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 PTGES2Q9H7Z7 377 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.59■□□□□ 0.41
UPF1-209ENST00000600310 AP3M1Q9Y2T2 418 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 L3MBTL1Q9Y468 752 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 LIPGQ9Y5X9 500 aa17.59■□□□□ 0.41
UPF1-209ENST00000600310 TRGV5A0A0B4J1U4 118 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 ANKUB1A6NFN9 424 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 GTPBP1O00178 669 aaKnown RBP17.58■□□□□ 0.4
UPF1-209ENST00000600310 ZNF264O43296 627 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 OIP5O43482 229 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 HCRTR2O43614 444 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 SUSD5O60279 629 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 EIF4E2O60573 245 aaKnown RBP17.58■□□□□ 0.4
UPF1-209ENST00000600310 CSTAP01040 98 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 UBL4AP11441 157 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 ETS2P15036 469 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 DPP4P27487 766 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 PGM1P36871 562 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 RNF144AP50876 292 aaPredicted RBP17.58■□□□□ 0.4
UPF1-209ENST00000600310 KCNJ10P78508 379 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 GANABQ14697 944 aaKnown RBP17.58■□□□□ 0.4
UPF1-209ENST00000600310 ARHGAP11AQ6P4F7 1023 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 EIF3MQ7L2H7 374 aaKnown RBP17.58■□□□□ 0.4
UPF1-209ENST00000600310 CHERPQ8IWX8 916 aaKnown RBP17.58■□□□□ 0.4
UPF1-209ENST00000600310 CMIPQ8IY22 773 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 SLC15A3Q8IY34 581 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 ZZZ3Q8IYH5 903 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 FAM83FQ8NEG4 500 aaPredicted RBP17.58■□□□□ 0.4
UPF1-209ENST00000600310 OR52P1PQ8NH57 321 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 B4GALNT2Q8NHY0 566 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 C1GALT1C1Q96EU7 318 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 SH3YL1Q96HL8 342 aaPredicted RBP17.58■□□□□ 0.4
UPF1-209ENST00000600310 SLC6A15Q9H2J7 730 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 LDAHQ9H6V9 325 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 CMTM6Q9NX76 183 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 SLC35A3Q9Y2D2 325 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 CARD8Q9Y2G2 431 aa17.58■□□□□ 0.4
UPF1-209ENST00000600310 A0A1B0GTH9 108 aa17.57■□□□□ 0.4
UPF1-209ENST00000600310 J3QKU1 62 aa17.57■□□□□ 0.4
UPF1-209ENST00000600310 ZIC3O60481 467 aa17.57■□□□□ 0.4
UPF1-209ENST00000600310 THBS1P07996 1170 aa17.57■□□□□ 0.4
UPF1-209ENST00000600310 NID1P14543 1247 aa17.57■□□□□ 0.4
UPF1-209ENST00000600310 IL7RP16871 459 aa17.57■□□□□ 0.4
UPF1-209ENST00000600310 PCGF2P35227 344 aa17.57■□□□□ 0.4
UPF1-209ENST00000600310 P2RX1P51575 399 aa17.57■□□□□ 0.4
UPF1-209ENST00000600310 SUMO3P55854 103 aaPredicted RBP17.57■□□□□ 0.4
UPF1-209ENST00000600310 HSF1Q00613 529 aa17.57■□□□□ 0.4
UPF1-209ENST00000600310 ZNF117Q03924 483 aa17.57■□□□□ 0.4
UPF1-209ENST00000600310 MRPL49Q13405 166 aaKnown RBP17.57■□□□□ 0.4
UPF1-209ENST00000600310 NDUFAF6Q330K2 333 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms