RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 NTNG1Q9Y2I2 539 aa20.18■□□□□ 0.82
CHMP2A-204ENST00000597848 EML6Q6ZMW3 1958 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 FAM220BPB1ANY3 271 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 NPIPA5E9PKD4 350 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 SUV39H1O43463 412 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 GMFGO60234 142 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 GLSO94925 669 aaPredicted RBP20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 GDF1P27539 372 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 EEFSECP57772 596 aaKnown RBP20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 EIF3MQ7L2H7 374 aaKnown RBP20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 ZNF843Q8N446 348 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 TMEM251Q8N6I4 163 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 CPT1CQ8TCG5 803 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 WDR60Q8WVS4 1066 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 OIT3Q8WWZ8 545 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 SH3YL1Q96HL8 342 aaPredicted RBP20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 ZNF607Q96SK3 696 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 CDRT15Q96T59 188 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 TSPAN10Q9H1Z9 355 aaPredicted RBP20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 OLAHQ9NV23 265 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 TMEM181Q9P2C4 612 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 NPIPA1Q9UND3 350 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 C15orf41Q9Y2V0 281 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 DSPPQ9NZW4 1301 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 NINQ8N4C6 2090 aa20.17■□□□□ 0.82
CHMP2A-204ENST00000597848 B8ZZF3 427 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 ADAM10O14672 748 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 HCRTR2O43614 444 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 CBR3O75828 277 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 TRAPPC6AO75865 159 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 CYP7B1O75881 506 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 CSTAP01040 98 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 UBL4AP11441 157 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 ETS2P15036 469 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 MAGEA5P43359 124 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 GSK3BP49841 420 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 KCNJ10P78508 379 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 FGFBP1Q14512 234 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 LARS2Q15031 903 aaKnown RBP20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 HYAL4Q2M3T9 481 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 INTS11Q5TA45 600 aaKnown RBP20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 PRICKLE2Q7Z3G6 844 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 VRK2Q86Y07 508 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 MICU2Q8IYU8 434 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 FAR1Q8WVX9 515 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 KCTD14Q9BQ13 255 aaPredicted RBP20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 SPATA5L1Q9BVQ7 753 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 DEFB127Q9H1M4 99 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 ALG2Q9H553 416 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 GMPR2Q9P2T1 348 aaKnown RBP20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 ABCD2Q9UBJ2 740 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 FBXL2Q9UKC9 423 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 CARD8Q9Y2G2 431 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 IFT52Q9Y366 437 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 HRH3Q9Y5N1 445 aa20.16■□□□□ 0.82
CHMP2A-204ENST00000597848 ELOVL7A1L3X0 281 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 GSTA4O15217 222 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 SERPINB7O75635 380 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 RPS4Y1P22090 263 aaKnown RBP20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 CPOXP36551 454 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 SLC10A1Q14973 349 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 NDUFAF6Q330K2 333 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 LIN52Q52LA3 116 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 ZNF311Q5JNZ3 666 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 FAM109AQ8N4B1 249 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 TMCO5AQ8N6Q1 288 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 RNF148Q8N7C7 305 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 OR2M3Q8NG83 312 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 B4GALNT2Q8NHY0 566 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 ZNF703Q9H7S9 590 aaPredicted RBP20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 PTGES2Q9H7Z7 377 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 PACSIN3Q9UKS6 424 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 SLC35A3Q9Y2D2 325 aa20.15■□□□□ 0.82
CHMP2A-204ENST00000597848 CLDN24A6NM45 220 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 ZNF264O43296 627 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 OIP5O43482 229 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 DNAJA2O60884 412 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 C1QL1O75973 258 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 PDE9AO76083 593 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 UBTFL6P0CB48 400 aaPredicted RBP20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 NID1P14543 1247 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 MST1P26927 711 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 MSX1P28360 303 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 ADH7P40394 386 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 ZNF117Q03924 483 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 VEZF1Q14119 521 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 C6orf89Q6UWU4 347 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 BNC2Q6ZN30 1099 aaPredicted RBP20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 PATL1Q86TB9 770 aaKnown RBP20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 NR4A3Q92570 626 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 DTNBP1Q96EV8 351 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 SEC14L3Q9UDX4 400 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 DKKL1Q9UK85 242 aa20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 ZNF443Q9Y2A4 671 aaPredicted RBP20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 GPC6Q9Y625 555 aaPredicted RBP20.14■□□□□ 0.81
CHMP2A-204ENST00000597848 IGLV3-32A0A0A0MS00 114 aa20.13■□□□□ 0.81
CHMP2A-204ENST00000597848 M0QX08 132 aa20.13■□□□□ 0.81
CHMP2A-204ENST00000597848 CDC40O60508 579 aaKnown RBP eCLIP20.13■□□□□ 0.81
CHMP2A-204ENST00000597848 EIF4E2O60573 245 aaKnown RBP20.13■□□□□ 0.81
CHMP2A-204ENST00000597848 NUDT14O95848 222 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms