RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 LYZL6O75951 148 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 PRKD3O94806 890 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 KCNH1O95259 989 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 PSMG1O95456 288 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 OTCP00480 354 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 C2P06681 752 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 YES1P07947 543 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 HSD3B1P14060 373 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 HSD3B2P26439 372 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 ELK4P28324 431 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 STX2P32856 288 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 GGTLC2Q14390 218 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 PLPPR5Q32ZL2 321 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 GRAMD1BQ3KR37 738 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 ZNF544Q6NX49 715 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 SLC22A25Q6T423 547 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 TMEM107Q6UX40 140 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 TMEM108Q6UXF1 575 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 APOOLQ6UXV4 268 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 Q6ZSR9 355 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 TRABD2AQ86V40 505 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 LILRA2Q8N149 483 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 SLC35F6Q8N357 371 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 CDYL2Q8N8U2 506 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 SLC9A6Q92581 669 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 MSI2Q96DH6 328 aaKnown RBP8.96□□□□□ -0.98
TRIM28-210ENST00000597618 ZMYND19Q96E35 227 aaPredicted RBP8.96□□□□□ -0.98
TRIM28-210ENST00000597618 PHF21BQ96EK2 531 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 NSUN5Q96P11 429 aaKnown RBP8.96□□□□□ -0.98
TRIM28-210ENST00000597618 DDX18Q9NVP1 670 aaKnown RBP8.96□□□□□ -0.98
TRIM28-210ENST00000597618 NPAP1Q9NZP6 1156 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 C19orf53Q9UNZ5 99 aaPredicted RBP8.96□□□□□ -0.98
TRIM28-210ENST00000597618 SNX24Q9Y343 169 aa8.96□□□□□ -0.98
TRIM28-210ENST00000597618 TGP01266 2768 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 A0A096LPK6 155 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 TTC36A6NLP5 189 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 GJE1A6NN92 205 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 MYO1GB0I1T2 1018 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 ZNF814B7Z6K7 855 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 ALG1L2C9J202 215 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 NDUFS8O00217 210 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 UPK1AO00322 258 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 NGFRP08138 427 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 DHRS4L1P0CG22 281 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 APEHP13798 732 aaKnown RBP8.95□□□□□ -0.98
TRIM28-210ENST00000597618 TCP1P17987 556 aaKnown RBP8.95□□□□□ -0.98
TRIM28-210ENST00000597618 GGT1P19440 569 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 SFTPDP35247 375 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 EIF1P41567 113 aaKnown RBP8.95□□□□□ -0.98
TRIM28-210ENST00000597618 OR3A2P47893 321 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 FABP6P51161 128 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 NCBP2P52298 156 aaKnown RBP eCLIP8.95□□□□□ -0.98
TRIM28-210ENST00000597618 CHRNB3Q05901 458 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 CALCOCO2Q13137 446 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 SPIN4Q56A73 249 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 TECRLQ5HYJ1 363 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 MROH9Q5TGP6 573 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 LETMD1Q6P1Q0 360 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 KLHL17Q6TDP4 642 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 FCRLAQ7L513 359 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 LRRC8AQ8IWT6 810 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 DEPDC4Q8N2C3 294 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 OR2L13Q8N349 312 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 SLC43A2Q8N370 569 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 OR2W6PQ8NHA6 318 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 GPR78Q96P69 363 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 NPAS1Q99742 590 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 PIMREGQ9BSJ6 248 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 LMF2Q9BU23 707 aaKnown RBP8.95□□□□□ -0.98
TRIM28-210ENST00000597618 SRXN1Q9BYN0 137 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 C12orf65Q9H3J6 166 aaKnown RBP8.95□□□□□ -0.98
TRIM28-210ENST00000597618 KLHL9Q9P2J3 617 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 FKBP7Q9Y680 259 aa8.95□□□□□ -0.98
TRIM28-210ENST00000597618 ESYT3A0FGR9 886 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 OR5H1A6NKK0 313 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 VWC2LB2RUY7 222 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 KCNAB3O43448 404 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 SMIM24O75264 130 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 PGM3O95394 542 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 OXSR1O95747 527 aaPredicted RBP8.94□□□□□ -0.98
TRIM28-210ENST00000597618 TGFAP01135 160 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 KRT6AP02538 564 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 KRT6BP04259 564 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 JUNP05412 331 aaKnown RBP8.94□□□□□ -0.98
TRIM28-210ENST00000597618 RBP1P09455 135 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 COL6A2P12110 1019 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 ITGA2P17301 1181 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 COX5AP20674 150 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 DDCP20711 480 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 PTAFRP25105 342 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 NTSP30990 170 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 GABRA3P34903 492 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 NR4A2P43354 598 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 GSTM5P46439 218 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 KRT6CP48668 564 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 PDLIM4P50479 330 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 MANFP55145 182 aaKnown RBP8.94□□□□□ -0.98
TRIM28-210ENST00000597618 SLC18A2Q05940 514 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 ACSM2AQ08AH3 577 aa8.94□□□□□ -0.98
TRIM28-210ENST00000597618 SLC29A2Q14542 456 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms