RNA–Protein interactions for RNA: ENST00000596351.5

LTBP4-215, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-215	ENST00000596351	RNF165	Q6ZSG1	346 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	COX18	Q8N8Q8	333 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	POC1B	Q8TC44	478 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	FAM110B	Q8TC76	370 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	CDS1	Q92903	461 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	FAM120B	Q96EK7	910 aa	Known RBP	10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	CHMP6	Q96FZ7	201 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	ADGRG7	Q96K78	797 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	C18orf12	Q96KH6	178 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	C1orf50	Q9BV19	199 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	PRRG4	Q9BZD6	226 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	PPCS	Q9HAB8	311 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	ACSS1	Q9NUB1	689 aa	Predicted RBP	10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	ZCCHC3	Q9NUD5	404 aa	Known RBP	10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	GIN1	Q9NXP7	522 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	MID2	Q9UJV3	735 aa		10.83	□□□□□ -0.68
LTBP4-215	ENST00000596351	UQCRHL	A0A096LP55	91 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351		A0A0J9YW62	118 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	SCAMP2	O15127	329 aa	Known RBP	10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	OIP5	O43482	229 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	PLG	P00747	810 aa	Predicted RBP	10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	HMGN2	P05204	90 aa	Known RBP	10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	THBD	P07204	575 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	LAMP1	P11279	417 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	FCGR2A	P12318	317 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	SHC1	P29353	583 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	ADSL	P30566	484 aa	Predicted RBP	10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	HPCAL1	P37235	193 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	ASMT	P46597	345 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	PCYT1A	P49585	367 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	PRIM2	P49643	509 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	ZNF41	P51814	821 aa	Predicted RBP	10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	POU6F2	P78424	691 aa	Predicted RBP	10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	LASP1	Q14847	261 aa	Known RBP	10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	PTGR1	Q14914	329 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	EXOSC6	Q5RKV6	272 aa	Known RBP	10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	WDR75	Q8IWA0	830 aa	Known RBP	10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	BANP	Q8N9N5	519 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	EIF1AD	Q8N9N8	165 aa	Known RBP	10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	OR6Y1	Q8NGX8	325 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	C3orf30	Q96M34	536 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	TRMO	Q9BU70	441 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	IQCG	Q9H095	443 aa	Known RBP	10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	MKS1	Q9NXB0	559 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	ATP6V1H	Q9UI12	483 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	TMED5	Q9Y3A6	229 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	EMC9	Q9Y3B6	208 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	TRAF6	Q9Y4K3	522 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	SNX8	Q9Y5X2	465 aa		10.82	□□□□□ -0.68
LTBP4-215	ENST00000596351	CAD	P27708	2225 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351		A0A087WZY1	265 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	SCD	O00767	359 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	NPHS1	O60500	1241 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	SMPD2	O60906	423 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	SS18L1	O75177	396 aa	Predicted RBP	10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	PEX11A	O75192	247 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	SKAP2	O75563	359 aa	Predicted RBP	10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	INHBB	P09529	407 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	HPGD	P15428	266 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	SFTPD	P35247	375 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	CTBP2	P56545	445 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	OCRL	Q01968	901 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	ZNF117	Q03924	483 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	LTB	Q06643	244 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	FOXF1	Q12946	379 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	TP53BP2	Q13625	1128 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	FGFBP1	Q14512	234 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	ACKR1	Q16570	336 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	NDUFAF6	Q330K2	333 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	XKR7	Q5GH72	579 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	SHE	Q5VZ18	495 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	HBM	Q6B0K9	141 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	BIVM	Q86UB2	503 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	TRABD2A	Q86V40	505 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	P3H2	Q8IVL5	708 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	CIART	Q8N365	385 aa	Predicted RBP	10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	KRTCAP2	Q8N6L1	136 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	OR6K3	Q8NGY3	331 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	OR2V1	Q8NHB1	315 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	B4GALNT2	Q8NHY0	566 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	ZBTB8A	Q96BR9	441 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	MTERF3	Q96E29	417 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	PERP	Q96FX8	193 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	CCL19	Q99731	98 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	C12orf49	Q9H741	205 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	CXorf36	Q9H7Y0	433 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	UBQLN4	Q9NRR5	601 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	MCTS1	Q9ULC4	181 aa	Known RBP	10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	KCNE3	Q9Y6H6	103 aa		10.81	□□□□□ -0.68
LTBP4-215	ENST00000596351	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	10.8	□□□□□ -0.68
LTBP4-215	ENST00000596351	C7orf72	A4D263	438 aa		10.8	□□□□□ -0.68
LTBP4-215	ENST00000596351	ADAMDEC1	O15204	470 aa		10.8	□□□□□ -0.68
LTBP4-215	ENST00000596351	SLU7	O95391	586 aa	Known RBP	10.8	□□□□□ -0.68
LTBP4-215	ENST00000596351	SYNGR4	O95473	234 aa		10.8	□□□□□ -0.68
LTBP4-215	ENST00000596351	NTN1	O95631	604 aa		10.8	□□□□□ -0.68
LTBP4-215	ENST00000596351	C6orf47	O95873	294 aa		10.8	□□□□□ -0.68
LTBP4-215	ENST00000596351	FGF4	P08620	206 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms