RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ZNF41P51814 821 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 EEFSECP57772 596 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 ZNF141Q15928 474 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 AP1ARQ63HQ0 302 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 DNAJC14Q6Y2X3 702 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 OR10Q1Q8NGQ4 319 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 TTYH2Q9BSA4 534 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 MKLN1Q9UL63 735 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 KLF2Q9Y5W3 355 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 NPIPA5A0A0B4J1W7 369 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 A0A1W2PP18 115 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 SERINC4A6NH21 518 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 C17orf51A8MQB3 221 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 NPIPA7E9PJI5 369 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 FCMRO60667 390 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 CLDN14O95500 239 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 NPIPA8P0DM63 369 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 GLI4P10075 376 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 NR2F1P10589 423 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 PPIBP23284 216 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 CHRNB4P30926 498 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 P2RX1P51575 399 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 SUMO3P55854 103 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 NUP107P57740 925 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 GNA13Q14344 377 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 RTL6Q6ICC9 239 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 SLC2A7Q6PXP3 512 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 LRRC74BQ6ZQY2 392 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 CHMP1BQ7LBR1 199 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 ZNF619Q8N2I2 560 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 MEIOBQ8N635 442 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 PNPT1Q8TCS8 783 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 ZPLD1Q8TCW7 415 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 CA5BP1Q8WTZ4 195 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 TSPEARQ8WU66 669 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 ZBTB8AQ96BR9 441 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 SDCCAG3Q96C92 435 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 SH3YL1Q96HL8 342 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 PAIP1Q9H074 479 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 SAP130Q9H0E3 1048 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 CALML5Q9NZT1 146 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 PCDHB14Q9Y5E9 798 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 FAM215AQ9Y5M1 114 aa15.66■□□□□ 0.1
SHKBP1-212ENST00000596163 GTF3C1Q12789 2109 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 B4DXG7 233 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 H0Y3Z8 333 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 CLIC1O00299 241 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 DYNC1I1O14576 645 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 ZNF264O43296 627 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 GMFGO60234 142 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 KIAA0513O60268 411 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 UBL4AP11441 157 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 ZNF17P17021 662 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 POU3F2P20265 443 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 TCEA1P23193 301 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 ADH7P40394 386 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 EIF1P41567 113 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 B3GALT5-AS1P59052 145 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 CD226Q15762 336 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 ACSF3Q4G176 576 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 PDZK1Q5T2W1 519 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 RIPPLY2Q5TAB7 128 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 TYW3Q6IPR3 259 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 EIF3MQ7L2H7 374 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 LACC1Q8IV20 430 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 MARVELD2Q8N4S9 558 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 TOR1AIP2Q8NFQ8 470 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 MTHFD2LQ9H903 347 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 CALHM2Q9HA72 323 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 SLC6A13Q9NSD5 602 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 KLHL14Q9P2G3 628 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 P2RX2Q9UBL9 471 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 LEF1Q9UJU2 399 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 RNF6Q9Y252 685 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 VDAC3Q9Y277 283 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 NDUFAF1Q9Y375 327 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 AP4B1Q9Y6B7 739 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 ZNF407Q9C0G0 2248 aa15.65■□□□□ 0.1
SHKBP1-212ENST00000596163 NUP214P35658 2090 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 MYO7BQ6PIF6 2116 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 OR2M5A3KFT3 312 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 CD8B2A6NJW9 211 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 HSPB2A8KAH6 182 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 ANGPT2O15123 496 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 UGT2B17O75795 530 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 H6PDO95479 791 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 CLDN1O95832 211 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 NUDT14O95848 222 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 IL2RAP01589 272 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 ZNF708P17019 499 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 STARP49675 285 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 LHX2P50458 406 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 DSTNP60981 165 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 ZNF117Q03924 483 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 SRYQ05066 204 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 FADDQ13158 208 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 HSPB2Q16082 182 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 DOPEY1Q5JWR5 2465 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms