RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 ZNF41P51814 821 aaPredicted RBP21.4■■□□□ 1.02
LSM4-202ENST00000593564 DUSP5Q16690 384 aa21.4■■□□□ 1.02
LSM4-202ENST00000593564 ZCCHC12Q6PEW1 402 aa21.4■■□□□ 1.02
LSM4-202ENST00000593564 FIGNL1Q6PIW4 674 aa21.4■■□□□ 1.02
LSM4-202ENST00000593564 SZRD1Q7Z422 152 aa21.4■■□□□ 1.02
LSM4-202ENST00000593564 CCDC63Q8NA47 563 aa21.4■■□□□ 1.02
LSM4-202ENST00000593564 OR2T11Q8NH01 316 aa21.4■■□□□ 1.02
LSM4-202ENST00000593564 OR2V1Q8NHB1 315 aa21.4■■□□□ 1.02
LSM4-202ENST00000593564 FBXO30Q8TB52 745 aa21.4■■□□□ 1.02
LSM4-202ENST00000593564 RNF145Q96MT1 663 aa21.4■■□□□ 1.02
LSM4-202ENST00000593564 C12orf65Q9H3J6 166 aaKnown RBP21.4■■□□□ 1.02
LSM4-202ENST00000593564 HIVEP2P31629 2446 aa21.39■■□□□ 1.02
LSM4-202ENST00000593564 TRIM64A6NGJ6 449 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 TRIM64BA6NI03 449 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 KIF2AO00139 706 aaPredicted RBP21.39■■□□□ 1.01
LSM4-202ENST00000593564 TNFSF11O14788 317 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 OPN1LWP04000 364 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 HPGDP15428 266 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 PTH2RP49190 550 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 NR1H2P55055 460 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 EXOSC6Q5RKV6 272 aaKnown RBP21.39■■□□□ 1.01
LSM4-202ENST00000593564 ZNF704Q6ZNC4 412 aaPredicted RBP21.39■■□□□ 1.01
LSM4-202ENST00000593564 BEND4Q6ZU67 534 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 RHOXF2Q9BQY4 288 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 OR10A4Q9H209 315 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 TUBB1Q9H4B7 451 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 TMED5Q9Y3A6 229 aa21.39■■□□□ 1.01
LSM4-202ENST00000593564 A0A0J9YW62 118 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 A0A1W2PQD3 144 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 COPEO14579 308 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 SMAD7O15105 426 aaKnown RBP21.38■■□□□ 1.01
LSM4-202ENST00000593564 SHBGP04278 402 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 ALOX5P09917 674 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 PAX1P15863 534 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 ME2P23368 584 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 SERPINB4P48594 390 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 RPL38P63173 70 aaKnown RBP21.38■■□□□ 1.01
LSM4-202ENST00000593564 RFTN2Q52LD8 501 aaPredicted RBP21.38■■□□□ 1.01
LSM4-202ENST00000593564 PDSS1Q5T2R2 415 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 HBMQ6B0K9 141 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 STK32CQ86UX6 486 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 TDRPQ86YL5 185 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 CLHC1Q8NHS4 586 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 POC1BQ8TC44 478 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 NUDT8Q8WV74 236 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 MTERF3Q96E29 417 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 C16orf58Q96GQ5 468 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 SH3YL1Q96HL8 342 aaPredicted RBP21.38■■□□□ 1.01
LSM4-202ENST00000593564 TRMOQ9BU70 441 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 ACTR6Q9GZN1 396 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 TMEM185BQ9H7F4 350 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 PPCSQ9HAB8 311 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 FBXO34Q9NWN3 711 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 BAIAP2L1Q9UHR4 511 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 GPR52Q9Y2T5 361 aa21.38■■□□□ 1.01
LSM4-202ENST00000593564 SCDO00767 359 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 LSM1O15116 133 aaKnown RBP21.37■■□□□ 1.01
LSM4-202ENST00000593564 TMCC2O75069 709 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 HSPA4LO95757 839 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 CHEK2O96017 543 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 AGTR1P30556 359 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 KANK2Q63ZY3 851 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 TRABD2AQ86V40 505 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 C10orf107Q8IVU9 208 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 GSPT2Q8IYD1 628 aaKnown RBP21.37■■□□□ 1.01
LSM4-202ENST00000593564 COX18Q8N8Q8 333 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 B4GALNT2Q8NHY0 566 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 KIF18AQ8NI77 898 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 KLHL15Q96M94 604 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 KLHDC3Q9BQ90 382 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 TMEM204Q9BSN7 226 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 MID2Q9UJV3 735 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 FIS1Q9Y3D6 152 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 DNAJC15Q9Y5T4 150 aa21.37■■□□□ 1.01
LSM4-202ENST00000593564 TUBBP07437 444 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 LINC00032P0C843 101 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 PSMB1P20618 241 aaKnown RBP21.36■■□□□ 1.01
LSM4-202ENST00000593564 ASMTP46597 345 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 PRIM2P49643 509 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 MLC1Q15049 377 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 CD226Q15762 336 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 CCNJQ5T5M9 372 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 GTF2IRD2BQ6EKJ0 949 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 GTF2IRD2Q86UP8 949 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 HOMEZQ8IX15 550 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 TMEM171Q8WVE6 324 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 OSTF1Q92882 214 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 FAM120BQ96EK7 910 aaKnown RBP21.36■■□□□ 1.01
LSM4-202ENST00000593564 OTUB1Q96FW1 271 aaPredicted RBP21.36■■□□□ 1.01
LSM4-202ENST00000593564 GATA5Q9BWX5 397 aaPredicted RBP21.36■■□□□ 1.01
LSM4-202ENST00000593564 BTBD2Q9BX70 525 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 DUSP22Q9NRW4 184 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 ZNF701Q9NV72 531 aaPredicted RBP21.36■■□□□ 1.01
LSM4-202ENST00000593564 HEATR5AQ86XA9 2040 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 USF3Q68DE3 2245 aa21.36■■□□□ 1.01
LSM4-202ENST00000593564 CNOT4O95628 575 aaKnown RBP21.35■■□□□ 1.01
LSM4-202ENST00000593564 LINGO3P0C6S8 592 aa21.35■■□□□ 1.01
LSM4-202ENST00000593564 DDX5P17844 614 aaKnown RBP21.35■■□□□ 1.01
LSM4-202ENST00000593564 KRT4P19013 534 aa21.35■■□□□ 1.01
LSM4-202ENST00000593564 ELK4P28324 431 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms