RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 ZAR1Q86SH2 424 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 NUDCD3Q8IVD9 361 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 RIMKLAQ8IXN7 391 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 MEIOBQ8N635 442 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 NATD1Q8N6N6 113 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 COX18Q8N8Q8 333 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 TUBGCP3Q96CW5 907 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 COQ8BQ96D53 544 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 PKNOX2Q96KN3 472 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 STACQ99469 402 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 RBM24Q9BX46 236 aaKnown RBP11.89□□□□□ -0.51
H3F3B-213ENST00000593254 PIGMQ9H3S5 423 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 ZNF395Q9H8N7 513 aaPredicted RBP11.89□□□□□ -0.51
H3F3B-213ENST00000593254 HHATLQ9HCP6 504 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 SSU72Q9NP77 194 aaKnown RBP11.89□□□□□ -0.51
H3F3B-213ENST00000593254 DUSP22Q9NRW4 184 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 ZCCHC3Q9NUD5 404 aaKnown RBP11.89□□□□□ -0.51
H3F3B-213ENST00000593254 ATAD3AQ9NVI7 634 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 BEX4Q9NWD9 120 aaPredicted RBP11.89□□□□□ -0.51
H3F3B-213ENST00000593254 FBXO34Q9NWN3 711 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 GIN1Q9NXP7 522 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 RAB21Q9UL25 225 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 ROS1P08922 2347 aa11.89□□□□□ -0.51
H3F3B-213ENST00000593254 A0A1W2PNV4 684 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 H3BML4 177 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 BIRC5O15392 142 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 NDUFB5O43674 189 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 ITM2AO43736 263 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 TNFRSF21O75509 655 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 HSPA4LO95757 839 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 SERPINE1P05121 402 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 DHRS4L1P0CG22 281 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 EPXP11678 715 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 PRPS1L1P21108 318 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 PCSK6P29122 969 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 CLDN20P56880 219 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 EEFSECP57772 596 aaKnown RBP11.88□□□□□ -0.51
H3F3B-213ENST00000593254 C21orf58P58505 322 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 POU6F2P78424 691 aaPredicted RBP11.88□□□□□ -0.51
H3F3B-213ENST00000593254 NKX6-1P78426 367 aaPredicted RBP11.88□□□□□ -0.51
H3F3B-213ENST00000593254 OCRLQ01968 901 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 LASP1Q14847 261 aaKnown RBP11.88□□□□□ -0.51
H3F3B-213ENST00000593254 TNFAIP8L3Q5GJ75 292 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 OR2A2Q6IF42 318 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 P4HA3Q7Z4N8 544 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 LUZP2Q86TE4 346 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
H3F3B-213ENST00000593254 KRTCAP2Q8N6L1 136 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 METTL25Q8N6Q8 603 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 OR5M1Q8NGP8 315 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 OR5P2Q8WZ92 322 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 JADE3Q92613 823 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 OTUB1Q96FW1 271 aaPredicted RBP11.88□□□□□ -0.51
H3F3B-213ENST00000593254 ZIM3Q96PE6 472 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 YIPF4Q9BSR8 244 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 BTBD2Q9BX70 525 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 PIGUQ9H490 435 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 UBQLN4Q9NRR5 601 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 GALNT8Q9NY28 637 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 ASIC5Q9NY37 505 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 ADAM21Q9UKJ8 722 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 PACSIN3Q9UKS6 424 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 SNX8Q9Y5X2 465 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 AP4B1Q9Y6B7 739 aa11.88□□□□□ -0.51
H3F3B-213ENST00000593254 A0A1W2PQD3 144 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 A8MXE2 369 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 SHISA8B8ZZ34 492 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 MSTNO14793 375 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 TM9SF1O15321 606 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 SEC14L5O43304 696 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 GMFGO60234 142 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 GOSR1O95249 250 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 C6orf47O95873 294 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 G6PDP11413 515 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 ZNF17P17021 662 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 CPA2P48052 419 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 CCT3P49368 545 aaKnown RBP11.87□□□□□ -0.51
H3F3B-213ENST00000593254 EMX2Q04743 252 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 MAD2L1Q13257 205 aaPredicted RBP11.87□□□□□ -0.51
H3F3B-213ENST00000593254 CHI3L2Q15782 390 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 SMU1Q2TAY7 513 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 LSM12Q3MHD2 195 aaKnown RBP11.87□□□□□ -0.51
H3F3B-213ENST00000593254 CCNJQ5T5M9 372 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 CDC73Q6P1J9 531 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 MISPQ8IVT2 679 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 CIARTQ8N365 385 aaPredicted RBP11.87□□□□□ -0.51
H3F3B-213ENST00000593254 ZNF781Q8N8C0 355 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 GATSQ8NAP1 163 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 OR56A1Q8NGH5 318 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 PPP1R14CQ8TAE6 165 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 LINC01560Q8TB33 94 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 SFXN5Q8TD22 340 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 ACTRT2Q8TDY3 377 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 FIG4Q92562 907 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 CDS1Q92903 461 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 PRPF18Q99633 342 aaKnown RBP11.87□□□□□ -0.51
H3F3B-213ENST00000593254 PINK1Q9BXM7 581 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 ACTRT3Q9BYD9 372 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 BHLHE41Q9C0J9 482 aaPredicted RBP11.87□□□□□ -0.51
H3F3B-213ENST00000593254 C20orf27Q9GZN8 174 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms