RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 MED17Q9NVC6 651 aa16.09■□□□□ 0.17
CIRBP-243ENST00000593128 SLC17A7Q9P2U7 560 aa16.09■□□□□ 0.17
CIRBP-243ENST00000593128 ACANP16112 2415 aa16.08■□□□□ 0.17
CIRBP-243ENST00000593128 NPIPA5A0A0B4J1W7 369 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 TMEM114B3SHH9 223 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 NPIPA7E9PJI5 369 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 NPIPB8E9PQR5 432 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 ARHGEF9O43307 516 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 TBX19O60806 448 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 SKAP2O75563 359 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-243ENST00000593128 SLU7O95391 586 aaKnown RBP16.08■□□□□ 0.16
CIRBP-243ENST00000593128 HMGN2P05204 90 aaKnown RBP16.08■□□□□ 0.16
CIRBP-243ENST00000593128 NPIPA8P0DM63 369 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 HOXB4P17483 251 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-243ENST00000593128 DDX5P17844 614 aaKnown RBP16.08■□□□□ 0.16
CIRBP-243ENST00000593128 ATP6V1C1P21283 382 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 MAPK1P28482 360 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 SFTPDP35247 375 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 MAP3K8P41279 467 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 IFFO1Q0D2I5 559 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 TP53BP2Q13625 1128 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 ACKR1Q16570 336 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.08■□□□□ 0.16
CIRBP-243ENST00000593128 TMEM44Q2T9K0 475 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 PLPPR5Q32ZL2 321 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 HBMQ6B0K9 141 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 CXorf67Q86X51 503 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-243ENST00000593128 ZNF614Q8N883 585 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 EIF1ADQ8N9N8 165 aaKnown RBP16.08■□□□□ 0.16
CIRBP-243ENST00000593128 ATP6V1C2Q8NEY4 427 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 OR2V1Q8NHB1 315 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 PHOSPHO1Q8TCT1 267 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 ZBTB8AQ96BR9 441 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 PERPQ96FX8 193 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 ZNF764Q96H86 408 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-243ENST00000593128 HS3ST6Q96QI5 342 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 KLHDC3Q9BQ90 382 aa16.08■□□□□ 0.16
CIRBP-243ENST00000593128 FLNAP21333 2647 aaKnown RBP16.08■□□□□ 0.16
CIRBP-243ENST00000593128 SCAMP2O15127 329 aaKnown RBP16.07■□□□□ 0.16
CIRBP-243ENST00000593128 NPHS1O60500 1241 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 INHBBP09529 407 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 FRKP42685 505 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-243ENST00000593128 CD226Q15762 336 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 PDSS1Q5T2R2 415 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 CPTPQ5TA50 214 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 SHEQ5VZ18 495 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 LRIG3Q6UXM1 1119 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 BIVMQ86UB2 503 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 KRTAP1-3Q8IUG1 177 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 GTPBP8Q8N3Z3 284 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-243ENST00000593128 OR6K3Q8NGY3 331 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 FAM110BQ8TC76 370 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 HOXB13Q92826 284 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-243ENST00000593128 PIGTQ969N2 578 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 MTERF3Q96E29 417 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 GMPPAQ96IJ6 420 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-243ENST00000593128 PPP3R2Q96LZ3 170 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 BTBD2Q9BX70 525 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 HHATLQ9HCP6 504 aa16.07■□□□□ 0.16
CIRBP-243ENST00000593128 A0A0J9YW62 118 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 SMAD7O15105 426 aaKnown RBP16.06■□□□□ 0.16
CIRBP-243ENST00000593128 CFLARO15519 480 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 NGFRP08138 427 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 LAMP1P11279 417 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 IL11P20809 199 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 FPR1P21462 350 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 SOAT1P35610 550 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 RPL3P39023 403 aaKnown RBP16.06■□□□□ 0.16
CIRBP-243ENST00000593128 RAC1P63000 192 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 LTBQ06643 244 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 FOXF1Q12946 379 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 PTGR1Q14914 329 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 GUSBP1Q15486 140 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 ATP6AP1LQ52LC2 224 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 CDC73Q6P1J9 531 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 ZCCHC12Q6PEW1 402 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 CLEC9AQ6UXN8 241 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 RNF165Q6ZSG1 346 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 C22orf34Q6ZV56 151 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 TRABD2AQ86V40 505 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 WFDC8Q8IUA0 241 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 MISPQ8IVT2 679 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 LILRA2Q8N149 483 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 TMCO5AQ8N6Q1 288 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 BANPQ8N9N5 519 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 FNDC5Q8NAU1 212 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 RFWD2Q8NHY2 731 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 TCP10LQ8TDR4 215 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 ADAMTS15Q8TE58 950 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 NUDT8Q8WV74 236 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 ROBO4Q8WZ75 1007 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 REXO5Q96IC2 774 aaKnown RBP16.06■□□□□ 0.16
CIRBP-243ENST00000593128 SIRT3Q9NTG7 399 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-243ENST00000593128 PAQR5Q9NXK6 330 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-243ENST00000593128 NTMQ9P121 344 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 ATP6V1HQ9UI12 483 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 FAF1Q9UNN5 650 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-243ENST00000593128 HEATR5AQ86XA9 2040 aa16.06■□□□□ 0.16
CIRBP-243ENST00000593128 GTPBP1O00178 669 aaKnown RBP16.05■□□□□ 0.16
CIRBP-243ENST00000593128 SS18L1O75177 396 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms