RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PLA2G3Q9NZ20 509 aa10.93□□□□□ -0.66
DDX39A-219ENST00000592927 BAG5Q9UL15 447 aa10.93□□□□□ -0.66
DDX39A-219ENST00000592927 GPR55Q9Y2T6 319 aaPredicted RBP10.93□□□□□ -0.66
DDX39A-219ENST00000592927 ABCA2Q9BZC7 2435 aa10.93□□□□□ -0.66
DDX39A-219ENST00000592927 PRAMEF27A3QJZ7 478 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 FRG2CA6NGY1 282 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 ACOX3O15254 700 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 DPM1O60762 260 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 DEAF1O75398 565 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 TIPRLO75663 272 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 F10P00742 488 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 SEMG1P04279 462 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 ACP2P11117 423 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 MAGEA2P43356 314 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 CYB561P49447 251 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 ST13P50502 369 aaKnown RBP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 SESN3P58005 492 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 PSPHP78330 225 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 OC90Q02509 493 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 MAPK11Q15759 364 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 ATP6AP1Q15904 470 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 NNATQ16517 81 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 DUSP5Q16690 384 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 GPAT3Q53EU6 434 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 AP1ARQ63HQ0 302 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 OPN5Q6U736 354 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 IGFL3Q6UXB1 125 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 SPNS3Q6ZMD2 512 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 PIWIL3Q7Z3Z3 882 aaKnown RBP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 WDR53Q7Z5U6 358 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 ARMC8Q8IUR7 673 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 SLC44A2Q8IWA5 706 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 LILRA2Q8N149 483 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 COX18Q8N8Q8 333 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 Q8NA96 180 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 SLC16A11Q8NCK7 471 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 NANOS1Q8WY41 292 aaKnown RBP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 LRTOMTQ8WZ04 291 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 SLC9A6Q92581 669 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 HAS2Q92819 552 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 HSPBAP1Q96EW2 488 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 SLC35A4Q96G79 324 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 HSH2DQ96JZ2 352 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 PKP2Q99959 881 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 TREX2Q9BQ50 279 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 UTP23Q9BRU9 249 aaKnown RBP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 BDH2Q9BUT1 245 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 RNF32Q9H0A6 362 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 NXF5Q9H1B4 397 aaKnown RBP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 IL1RAPQ9NPH3 570 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 POLE3Q9NRF9 147 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 AGPAT4Q9NRZ5 378 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 ANKRD10Q9NXR5 420 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 OR10H1Q9Y4A9 318 aa10.92□□□□□ -0.66
DDX39A-219ENST00000592927 GPC6Q9Y625 555 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-219ENST00000592927 DSPPQ9NZW4 1301 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 OR5H15A6NDH6 313 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 A8MVJ9 347 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 PEX1O43933 1283 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 OR6B1O95007 311 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 MFN2O95140 757 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 H6PDO95479 791 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 NADKO95544 446 aaPredicted RBP10.91□□□□□ -0.66
DDX39A-219ENST00000592927 CT45A8P0DMV1 189 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 CT45A9P0DMV2 189 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 AQP1P29972 269 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 GABRA3P34903 492 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 TRHRP34981 398 aaPredicted RBP10.91□□□□□ -0.66
DDX39A-219ENST00000592927 CD96P40200 585 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 SOX3P41225 446 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 HLCSP50747 726 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 CRYBA2P53672 197 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 POU6F2P78424 691 aaPredicted RBP10.91□□□□□ -0.66
DDX39A-219ENST00000592927 FUT5Q11128 374 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 TUBA3CQ13748 450 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 TRIP10Q15642 601 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 IFI44LQ53G44 452 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 CT45A2Q5DJT8 189 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 OGFRL1Q5TC84 451 aaPredicted RBP10.91□□□□□ -0.66
DDX39A-219ENST00000592927 TUBA3EQ6PEY2 450 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 NPSR1Q6W5P4 371 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 GPALPP1Q8IXQ4 340 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 FAM86B1Q8N7N1 296 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 ANKFN1Q8N957 763 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 GPR151Q8TDV0 419 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 GEMIN6Q8WXD5 167 aaKnown RBP10.91□□□□□ -0.66
DDX39A-219ENST00000592927 CDS1Q92903 461 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 TAMM41Q96BW9 452 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 CENPNQ96H22 339 aaPredicted RBP10.91□□□□□ -0.66
DDX39A-219ENST00000592927 MTHFD2LQ9H903 347 aaPredicted RBP10.91□□□□□ -0.66
DDX39A-219ENST00000592927 CACYBPQ9HB71 228 aaKnown RBP10.91□□□□□ -0.66
DDX39A-219ENST00000592927 Q9N2J8 555 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 C8orf4Q9NR00 106 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 HPF1Q9NWY4 346 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 DNAJB9Q9UBS3 223 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 V9GYQ6 96 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 SHANK1Q9Y566 2161 aa10.91□□□□□ -0.66
DDX39A-219ENST00000592927 HIVEP3Q5T1R4 2406 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 ANKUB1A6NFN9 424 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms