RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 MAST4O15021 2626 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 A0A087WZY1 265 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 FAM234BA2RU67 622 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 OR2M5A3KFT3 312 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 MBD3L4A6NDZ8 208 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-217ENST00000592391 MBD3L3A6NE82 208 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-217ENST00000592391 MBD3L5A6NJ08 208 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-217ENST00000592391 H3BNH8 94 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 RFXANKO14593 260 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 STX11O75558 287 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 GUSBP08236 651 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 PEPDP12955 493 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 POU3F2P20265 443 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-217ENST00000592391 KHKP50053 298 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 POLR2JP52435 117 aaKnown RBP13.13□□□□□ -0.31
DDX39A-217ENST00000592391 STX1BP61266 288 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 TMEM44Q2T9K0 475 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.13□□□□□ -0.31
DDX39A-217ENST00000592391 ATAD3BQ5T9A4 648 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 ZNF621Q6ZSS3 439 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 MSANTD1Q6ZTZ1 278 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 C16orf62Q7Z3J2 963 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 ADGRE4PQ86SQ3 457 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 LIX1LQ8IVB5 337 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 OR5M1Q8NGP8 315 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 B4GALNT2Q8NHY0 566 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 MBD3L2Q8NHZ7 208 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-217ENST00000592391 PHOSPHO1Q8TCT1 267 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 XAGE5Q8WWM1 108 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 RAB8BQ92930 207 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 SH3YL1Q96HL8 342 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-217ENST00000592391 UCN2Q96RP3 112 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 NMUR2Q9GZQ4 415 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 ZNF350Q9GZX5 532 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 VDAC3Q9Y277 283 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 ZNF337Q9Y3M9 751 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 DTNAQ9Y4J8 743 aa13.13□□□□□ -0.31
DDX39A-217ENST00000592391 CACNA1CQ13936 2221 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 C7orf72A4D263 438 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 NKX2-6A6NCS4 301 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 HCRTR2O43614 444 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 FCMRO60667 390 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 IL2RAP01589 272 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 C1QCP02747 245 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 GSNP06396 782 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 ZNF17P17021 662 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 ZNF41P51814 821 aaPredicted RBP13.12□□□□□ -0.31
DDX39A-217ENST00000592391 TXNL4AP83876 142 aaKnown RBP13.12□□□□□ -0.31
DDX39A-217ENST00000592391 ZNF117Q03924 483 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 TFF3Q07654 80 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 GPR68Q15743 365 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 SLC25A35Q3KQZ1 300 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 TIGD2Q4W5G0 525 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 RNF130Q86XS8 419 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 MEIOBQ8N635 442 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 ZNF614Q8N883 585 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 NAXEQ8NCW5 288 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 STON2Q8WXE9 905 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 MARVELD3Q96A59 401 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 ITCHQ96J02 903 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 RMND5AQ9H871 391 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 POLE3Q9NRF9 147 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 MED17Q9NVC6 651 aa13.12□□□□□ -0.31
DDX39A-217ENST00000592391 CLCA1A8K7I4 914 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 SHISA8B8ZZ34 492 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 H3BML4 177 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 HMGN4O00479 90 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 EDF1O60869 148 aaKnown RBP13.11□□□□□ -0.31
DDX39A-217ENST00000592391 TNFRSF21O75509 655 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 KRT75O95678 551 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 ZCCHC18P0CG32 403 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 COX6B1P14854 86 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 RNF144AP50876 292 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-217ENST00000592391 ANXA11P50995 505 aaKnown RBP13.11□□□□□ -0.31
DDX39A-217ENST00000592391 SUMO3P55854 103 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-217ENST00000592391 EEFSECP57772 596 aaKnown RBP13.11□□□□□ -0.31
DDX39A-217ENST00000592391 FUT5Q11128 374 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 ZNF141Q15928 474 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 PLPPR5Q32ZL2 321 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 PDZK1Q5T2W1 519 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 AP1ARQ63HQ0 302 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 CBLN3Q6UW01 205 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 DNAJC14Q6Y2X3 702 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-217ENST00000592391 UBQLNLQ8IYU4 475 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 GTPBP8Q8N3Z3 284 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-217ENST00000592391 C9orf106Q8NAJ2 232 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 ACBD4Q8NC06 268 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 OIT3Q8WWZ8 545 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 WNT2BQ93097 391 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 VPS33AQ96AX1 596 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 ZBTB8AQ96BR9 441 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 ROPN1LQ96C74 230 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 SPOCK3Q9BQ16 436 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 KLHDC3Q9BQ90 382 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 ENKD1Q9H0I2 346 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 RUBCNLQ9H714 662 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 SLC6A13Q9NSD5 602 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 CLCF1Q9UBD9 225 aa13.11□□□□□ -0.31
DDX39A-217ENST00000592391 ZNF629Q9UEG4 869 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-217ENST00000592391 KCNE5Q9UJ90 142 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms