RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 HOXD1Q9GZZ0 328 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 GSX1Q9H4S2 264 aaPredicted RBP16.92■□□□□ 0.3
CCDC43-205ENST00000592333 VDAC3Q9Y277 283 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 A0A1W2PRB8 838 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 SCDO00767 359 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 LYPLA1O75608 230 aaPredicted RBP16.91■□□□□ 0.3
CCDC43-205ENST00000592333 SYNGR4O95473 234 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 PLGP00747 810 aaPredicted RBP16.91■□□□□ 0.3
CCDC43-205ENST00000592333 ACP2P11117 423 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 ELK4P28324 431 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 CTBP2P56545 445 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 DUSP5Q16690 384 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 CTU2Q2VPK5 515 aaKnown RBP16.91■□□□□ 0.3
CCDC43-205ENST00000592333 PLPPR5Q32ZL2 321 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 UGT3A2Q3SY77 523 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 COX18Q8N8Q8 333 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 OR10D3Q8NH80 312 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 PSMA8Q8TAA3 256 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 PIGUQ9H490 435 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 GP6Q9HCN6 339 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 MED17Q9NVC6 651 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 ATAD3AQ9NVI7 634 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 TRAF6Q9Y4K3 522 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 PCNX3Q9H6A9 2034 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 NAV3Q8IVL0 2385 aa16.91■□□□□ 0.3
CCDC43-205ENST00000592333 ABCA2Q9BZC7 2435 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 UQCRHLA0A096LP55 91 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 AKAP10O43572 662 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 KRT16P08779 473 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 LINC00032P0C843 101 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 BCKDHAP12694 445 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 ADSLP30566 484 aaPredicted RBP16.9■□□□□ 0.3
CCDC43-205ENST00000592333 HPCAL1P37235 193 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 NR1H2P55055 460 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 SUMO3P55854 103 aaPredicted RBP16.9■□□□□ 0.3
CCDC43-205ENST00000592333 POU6F2P78424 691 aaPredicted RBP16.9■□□□□ 0.3
CCDC43-205ENST00000592333 BEX5Q5H9J7 111 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 ANKRD26P1Q6NSI1 321 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 STK32CQ86UX6 486 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 C4orf33Q8N1A6 199 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 ZNF527Q8NB42 609 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 OR2V1Q8NHB1 315 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 B4GALNT2Q8NHY0 566 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 EPS8L3Q8TE67 593 aaKnown RBP16.9■□□□□ 0.3
CCDC43-205ENST00000592333 MOAP1Q96BY2 351 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 FAM120BQ96EK7 910 aaKnown RBP16.9■□□□□ 0.3
CCDC43-205ENST00000592333 APOPT1Q96IL0 206 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 TIGARQ9NQ88 270 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 BAIAP2L1Q9UHR4 511 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 GPR52Q9Y2T5 361 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 PTGDR2Q9Y5Y4 395 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 ACTL7BQ9Y614 415 aa16.9■□□□□ 0.3
CCDC43-205ENST00000592333 GJE1A6NN92 205 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 SCAMP2O15127 329 aaKnown RBP16.89■□□□□ 0.29
CCDC43-205ENST00000592333 PAX1P15863 534 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 Q5PR19 223 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 FIGNL1Q6PIW4 674 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 SZRD1Q7Z422 152 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 DDIASQ8IXT1 998 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 GSPT2Q8IYD1 628 aaKnown RBP16.89■□□□□ 0.29
CCDC43-205ENST00000592333 BANPQ8N9N5 519 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 OR56A1Q8NGH5 318 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 TWIST2Q8WVJ9 160 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 PRPF18Q99633 342 aaKnown RBP16.89■□□□□ 0.29
CCDC43-205ENST00000592333 CCL19Q99731 98 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 BDH2Q9BUT1 245 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 HDHD5Q9BXW7 423 aa16.89■□□□□ 0.29
CCDC43-205ENST00000592333 C12orf65Q9H3J6 166 aaKnown RBP16.89■□□□□ 0.29
CCDC43-205ENST00000592333 ZCCHC3Q9NUD5 404 aaKnown RBP16.89■□□□□ 0.29
CCDC43-205ENST00000592333 SMIM23A6NLE4 172 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 H3BNH8 94 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 HMGN2P05204 90 aaKnown RBP16.88■□□□□ 0.29
CCDC43-205ENST00000592333 LINGO3P0C6S8 592 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 PSMB1P20618 241 aaKnown RBP16.88■□□□□ 0.29
CCDC43-205ENST00000592333 LOXP28300 417 aaPredicted RBP16.88■□□□□ 0.29
CCDC43-205ENST00000592333 SLC6A8P48029 635 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 LTBQ06643 244 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 RNPS1Q15287 305 aaKnown RBP16.88■□□□□ 0.29
CCDC43-205ENST00000592333 LSM12Q3MHD2 195 aaKnown RBP16.88■□□□□ 0.29
CCDC43-205ENST00000592333 GALNTL6Q49A17 601 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 XKR7Q5GH72 579 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 ARL13AQ5H913 290 aaPredicted RBP16.88■□□□□ 0.29
CCDC43-205ENST00000592333 CDC73Q6P1J9 531 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 STAC2Q6ZMT1 411 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 OR5P2Q8WZ92 322 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 CPNE4Q96A23 557 aaPredicted RBP16.88■□□□□ 0.29
CCDC43-205ENST00000592333 C16orf58Q96GQ5 468 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 RNF145Q96MT1 663 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 USB1Q9BQ65 265 aaKnown RBP16.88■□□□□ 0.29
CCDC43-205ENST00000592333 ACTRT3Q9BYD9 372 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 GSX2Q9BZM3 304 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 KLHL4Q9C0H6 718 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 SIRT3Q9NTG7 399 aaPredicted RBP16.88■□□□□ 0.29
CCDC43-205ENST00000592333 FIS1Q9Y3D6 152 aa16.88■□□□□ 0.29
CCDC43-205ENST00000592333 NSD1Q96L73 2696 aaPredicted RBP16.88■□□□□ 0.29
CCDC43-205ENST00000592333 SHISA8B8ZZ34 492 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 KLF4O43474 513 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 CXCL13O43927 109 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 HEXAP06865 529 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 TUBBP07437 444 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms