RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TRMOQ9BU70 441 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 TUBB1Q9H4B7 451 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 C3orf14Q9HBI5 128 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 HHATLQ9HCP6 504 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 ZNF226Q9NYT6 803 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 FLRT3Q9NZU0 649 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 NTMQ9P121 344 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 ZDHHC2Q9UIJ5 367 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 ACTL7BQ9Y614 415 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 VPS13CQ709C8 3753 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 H0YC42 278 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 C16orf97H3BN30 126 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 SLC28A1O00337 649 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 ARHGEF9O43307 516 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 RGS14O43566 566 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 TBX19O60806 448 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 SMNDC1O75940 238 aaKnown RBP eCLIP9.35□□□□□ -0.91
VPS4B-207ENST00000591519 NKX2-2O95096 273 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 SERPINE1P05121 402 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 NGFRP08138 427 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 PRPS2P11908 318 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 H2AFXP16104 143 aaPredicted RBP9.35□□□□□ -0.91
VPS4B-207ENST00000591519 NTSP30990 170 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 GABRA3P34903 492 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 UGT2B10P36537 528 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 TPD52P55327 224 aaPredicted RBP9.35□□□□□ -0.91
VPS4B-207ENST00000591519 CLDN20P56880 219 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 ABCE1P61221 599 aaKnown RBP9.35□□□□□ -0.91
VPS4B-207ENST00000591519 RPL38P63173 70 aaKnown RBP9.35□□□□□ -0.91
VPS4B-207ENST00000591519 ZNF155Q12901 538 aaPredicted RBP9.35□□□□□ -0.91
VPS4B-207ENST00000591519 PDCD2Q16342 344 aaPredicted RBP9.35□□□□□ -0.91
VPS4B-207ENST00000591519 RAET1LQ5VY80 246 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 APOOLQ6UXV4 268 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 RNF165Q6ZSG1 346 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 MARCH3Q86UD3 253 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 HOMEZQ8IX15 550 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 UBQLNLQ8IYU4 475 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 CNEP1R1Q8N9A8 125 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 ZNF610Q8N9Z0 462 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 CLHC1Q8NHS4 586 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 FNDC9Q8TBE3 224 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 FAM110BQ8TC76 370 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 PIGTQ969N2 578 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 GFM2Q969S9 779 aaKnown RBP9.35□□□□□ -0.91
VPS4B-207ENST00000591519 TLCD1Q96CP7 247 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 EGLN2Q96KS0 407 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 PINK1Q9BXM7 581 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 LRTM1Q9HBL6 345 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 PLSCR4Q9NRQ2 329 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 DDX18Q9NVP1 670 aaKnown RBP9.35□□□□□ -0.91
VPS4B-207ENST00000591519 NKIRAS1Q9NYS0 192 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 STOML1Q9UBI4 398 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 DNAJC15Q9Y5T4 150 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 ARID1AO14497 2285 aa9.35□□□□□ -0.91
VPS4B-207ENST00000591519 TMEM114B3SHH9 223 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 ALG1L2C9J202 215 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 BIRC5O15392 142 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 AKAP10O43572 662 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 PEX11AO75192 247 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 KCNH1O95259 989 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 UTS2O95399 124 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 ANGPTL1O95841 491 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 IGKV1D-16P01601 117 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 INHBBP09529 407 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 DHRS4L1P0CG22 281 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 POU2F1P14859 743 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 FPR1P21462 350 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 TCEA1P23193 301 aaKnown RBP9.34□□□□□ -0.91
VPS4B-207ENST00000591519 LCN1P31025 176 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 CPOXP36551 454 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 FRKP42685 505 aaPredicted RBP9.34□□□□□ -0.91
VPS4B-207ENST00000591519 SLC1A6P48664 564 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 RPS3AP61247 264 aaKnown RBP9.34□□□□□ -0.91
VPS4B-207ENST00000591519 STX3Q13277 289 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 PON3Q15166 354 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 ACKR1Q16570 336 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPS4B-207ENST00000591519 TTMPQ5BVD1 217 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 AGBL2Q5U5Z8 902 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 ZCCHC12Q6PEW1 402 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 LINC00114Q6XXX2 140 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 Q6ZSR9 355 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 C22orf34Q6ZV56 151 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 FAM214BQ7L5A3 538 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 ZNF551Q7Z340 670 aaPredicted RBP9.34□□□□□ -0.91
VPS4B-207ENST00000591519 GGNQ86UU5 652 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 ZNF781Q8N8C0 355 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 CDRT4Q8N9R6 151 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 OR6Y1Q8NGX8 325 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 OR4C3Q8NH37 302 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 CEP70Q8NHQ1 597 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 ACTRT2Q8TDY3 377 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 ZNF845Q96IR2 970 aaPredicted RBP9.34□□□□□ -0.91
VPS4B-207ENST00000591519 FCRL1Q96LA6 429 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 C3orf30Q96M34 536 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 TBL1XR1Q9BZK7 514 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 C20orf27Q9GZN8 174 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 OPN3Q9H1Y3 402 aaPredicted RBP9.34□□□□□ -0.91
VPS4B-207ENST00000591519 C1orf109Q9NX04 203 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 PAQR5Q9NXK6 330 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms