RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.32□□□□□ -1.08
DNMT1-223ENST00000591239 ATAD3BQ5T9A4 648 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 RAET1LQ5VY80 246 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 NSUN5P2Q63ZY6 315 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 TNFAIP8L2Q6P589 184 aaPredicted RBP8.32□□□□□ -1.08
DNMT1-223ENST00000591239 ARSKQ6UWY0 536 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF621Q6ZSS3 439 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 C16orf62Q7Z3J2 963 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 LACC1Q8IV20 430 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 MIER2Q8N344 545 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 TNIP2Q8NFZ5 429 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 OR5M1Q8NGP8 315 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 OR9I1Q8NGQ6 314 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 PHOSPHO1Q8TCT1 267 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 ZPLD1Q8TCW7 415 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 XAGE5Q8WWM1 108 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 RAB8BQ92930 207 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 SH3YL1Q96HL8 342 aaPredicted RBP8.32□□□□□ -1.08
DNMT1-223ENST00000591239 TRIB1Q96RU8 372 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 TUBA1CQ9BQE3 449 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 EBF4Q9BQW3 602 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 PIGQQ9BRB3 760 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 UCK2Q9BZX2 261 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 CALHM2Q9HA72 323 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 KCNJ16Q9NPI9 418 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 EXD2Q9NVH0 621 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF337Q9Y3M9 751 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 APCP25054 2843 aa8.32□□□□□ -1.08
DNMT1-223ENST00000591239 A0A087WZY1 265 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 FAM234BA2RU67 622 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 OR2M5A3KFT3 312 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 NKX2-6A6NCS4 301 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 FAM90A27PA6NNH2 459 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 HSPB2A8KAH6 182 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 H0Y3Z8 333 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 H3BNH8 94 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 C19orf84I3L1E1 186 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 LINC01387J3KSC0 135 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 RFXANKO14593 260 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 HNRNPRO43390 633 aaKnown RBP8.31□□□□□ -1.08
DNMT1-223ENST00000591239 HCRTR2O43614 444 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 FCMRO60667 390 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 TOXO94900 526 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 IL2RAP01589 272 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 C1QCP02747 245 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 GSNP06396 782 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 PEPDP12955 493 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF708P17019 499 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 CEACAM8P31997 349 aaPredicted RBP8.31□□□□□ -1.08
DNMT1-223ENST00000591239 MRPL19P49406 292 aaKnown RBP8.31□□□□□ -1.08
DNMT1-223ENST00000591239 KHKP50053 298 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 RNF144AP50876 292 aaPredicted RBP8.31□□□□□ -1.08
DNMT1-223ENST00000591239 CLDN18P56856 261 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 STX1BP61266 288 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 TFF3Q07654 80 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 GPR68Q15743 365 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 HSPB2Q16082 182 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 TMEM44Q2T9K0 475 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 TIGD2Q4W5G0 525 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 HEPHL1Q6MZM0 1159 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 MSANTD1Q6ZTZ1 278 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 MTERF4Q7Z6M4 381 aaKnown RBP8.31□□□□□ -1.08
DNMT1-223ENST00000591239 ADGRE4PQ86SQ3 457 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 RNF130Q86XS8 419 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 LIX1LQ8IVB5 337 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 MARVELD3Q96A59 401 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 VPS33AQ96AX1 596 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 CCDC28BQ9BUN5 200 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 NMUR2Q9GZQ4 415 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF350Q9GZX5 532 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 RMND5AQ9H871 391 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 SLC6A13Q9NSD5 602 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 MKLN1Q9UL63 735 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 VDAC3Q9Y277 283 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 DTNAQ9Y4J8 743 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 NOTCH2Q04721 2471 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 ARHGAP21Q5T5U3 1957 aa8.31□□□□□ -1.08
DNMT1-223ENST00000591239 MBD3L4A6NDZ8 208 aaPredicted RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 MBD3L3A6NE82 208 aaPredicted RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 MBD3L5A6NJ08 208 aaPredicted RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 CLCA1A8K7I4 914 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 SHISA8B8ZZ34 492 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 H0YC42 278 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 H3BML4 177 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 GTPBP1O00178 669 aaKnown RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 HMGN4O00479 90 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 EDF1O60869 148 aaKnown RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 GUSBP08236 651 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 SNRPB2P08579 225 aaKnown RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 ZCCHC18P0CG32 403 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 COX6B1P14854 86 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 POU3F2P20265 443 aaPredicted RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF41P51814 821 aaPredicted RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 TPD52P55327 224 aaPredicted RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 CLDN15P56746 228 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 TXNL4AP83876 142 aaKnown RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF117Q03924 483 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF141Q15928 474 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 PLPPR5Q32ZL2 321 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 COX20Q5RI15 118 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms