RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 TIMP3P35625 211 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 MRPL19P49406 292 aaKnown RBP16.46■□□□□ 0.23
DDX39A-212ENST00000590260 CLK3P49761 638 aaKnown RBP16.46■□□□□ 0.23
DDX39A-212ENST00000590260 MVDP53602 400 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 PLAURQ03405 335 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 GANABQ14697 944 aaKnown RBP16.46■□□□□ 0.23
DDX39A-212ENST00000590260 MAPK14Q16539 360 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 GSTA3Q16772 222 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 ARHGAP11BQ3KRB8 267 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 GTDC1Q4AE62 458 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 AP1ARQ63HQ0 302 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 TNFAIP8L2Q6P589 184 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-212ENST00000590260 FUNDC1Q8IVP5 155 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 SH3YL1Q96HL8 342 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-212ENST00000590260 UCN2Q96RP3 112 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 TRIM8Q9BZR9 551 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 ZNF350Q9GZX5 532 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 CHST11Q9NPF2 352 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 ZIM2Q9NZV7 527 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 PCDHGB4Q9UN71 923 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 VDAC3Q9Y277 283 aa16.46■□□□□ 0.23
DDX39A-212ENST00000590260 DCHS2Q6V1P9 2916 aa16.46■□□□□ 0.22
DDX39A-212ENST00000590260 DOCK7Q96N67 2140 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 CCDC154A6NI56 674 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 CLCA1A8K7I4 914 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 HMGN4O00479 90 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 HNRNPRO43390 633 aaKnown RBP16.45■□□□□ 0.22
DDX39A-212ENST00000590260 HCRTR2O43614 444 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 BCAS1O75363 584 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-212ENST00000590260 TNFRSF21O75509 655 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 TGDSO95455 350 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 HOXB9P17482 250 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-212ENST00000590260 MSX1P28360 303 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 ATP12AP54707 1039 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 DLX5P56178 289 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 CLDN20P56880 219 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 FOXF2Q12947 444 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 MAPK11Q15759 364 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 BCL2A1Q16548 175 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 PLPPR5Q32ZL2 321 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 GLYR1Q49A26 553 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-212ENST00000590260 FLYWCH1Q4VC44 716 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 COX20Q5RI15 118 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 RAET1LQ5VY80 246 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 BHLHB9Q6PI77 547 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 GLB1L3Q8NCI6 653 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-212ENST00000590260 VPS37AQ8NEZ2 397 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 ZG16BQ96DA0 208 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 ARSGQ96EG1 525 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 MAGEB18Q96M61 343 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 CALHM2Q9HA72 323 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 SLC52A3Q9NQ40 469 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 TCF7L2Q9NQB0 619 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 ICAM5Q9UMF0 924 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 ITPR2Q14571 2701 aa16.45■□□□□ 0.22
DDX39A-212ENST00000590260 H0Y3Z8 333 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 SCDO00767 359 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 EFNA2O43921 213 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 UGT2B17O75795 530 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 TGM6O95932 706 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 LINGO3P0C6S8 592 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 IL11P20809 199 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 AQP5P55064 265 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 TOMM34Q15785 309 aaPredicted RBP16.44■□□□□ 0.22
DDX39A-212ENST00000590260 ZNF141Q15928 474 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 PDZK1Q5T2W1 519 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 TYW3Q6IPR3 259 aaKnown RBP16.44■□□□□ 0.22
DDX39A-212ENST00000590260 AAGABQ6PD74 315 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 ENPP6Q6UWR7 440 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 FRRS1Q6ZNA5 592 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 GGNQ86UU5 652 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 LSRQ86X29 649 aaPredicted RBP16.44■□□□□ 0.22
DDX39A-212ENST00000590260 RNF130Q86XS8 419 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 GOLGA6L1Q8N7Z2 621 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 DYDC1Q8WWB3 177 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 VPS33AQ96AX1 596 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 PANX1Q96RD7 426 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 NMUR2Q9GZQ4 415 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 SAP130Q9H0E3 1048 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 PTGES2Q9H7Z7 377 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 MED17Q9NVC6 651 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 MKLN1Q9UL63 735 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 DTNAQ9Y4J8 743 aa16.44■□□□□ 0.22
DDX39A-212ENST00000590260 MAST4O15021 2626 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 DUXAA6NLW8 204 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 HSPB2A8KAH6 182 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 SOX30O94993 753 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 ATP6V1C1P21283 382 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 POLR2JP52435 117 aaKnown RBP16.43■□□□□ 0.22
DDX39A-212ENST00000590260 AGFG1P52594 562 aaKnown RBP16.43■□□□□ 0.22
DDX39A-212ENST00000590260 HSPB2Q16082 182 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 TIGD2Q4W5G0 525 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 DNAJC14Q6Y2X3 702 aaPredicted RBP16.43■□□□□ 0.22
DDX39A-212ENST00000590260 MCEMP1Q8IX19 187 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 UBQLNLQ8IYU4 475 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 B4GALNT2Q8NHY0 566 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 PNPT1Q8TCS8 783 aaKnown RBP16.43■□□□□ 0.22
DDX39A-212ENST00000590260 PHOSPHO1Q8TCT1 267 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 ZFP90Q8TF47 636 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 XAGE5Q8WWM1 108 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms