RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 SNX18Q96RF0 628 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 NDC1Q9BTX1 674 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 G6PC3Q9BUM1 346 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 PLA2G12AQ9BZM1 189 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 MKRN2Q9H000 416 aaKnown RBP6.67□□□□□ -1.34
SPIDR-228ENST00000588781 UBQLN3Q9H347 655 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 ABCB9Q9NP78 766 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 ADAP2Q9NPF8 381 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 CTPS2Q9NRF8 586 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 ERVK13-1Q9NX77 482 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 BABAM2Q9NXR7 383 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 CNIH4Q9P003 139 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 ZNF624Q9P2J8 865 aaPredicted RBP6.67□□□□□ -1.34
SPIDR-228ENST00000588781 RPS6KB2Q9UBS0 482 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 TEKT2Q9UIF3 430 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 CBLCQ9ULV8 474 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 SF3B6Q9Y3B4 125 aaKnown RBP6.67□□□□□ -1.34
SPIDR-228ENST00000588781 KCNE3Q9Y6H6 103 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 V9GYH0 126 aa6.67□□□□□ -1.34
SPIDR-228ENST00000588781 C2orf16Q68DN1 1984 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 CCDC88CQ9P219 2028 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 DAPL1A0PJW8 107 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 CDHR4A6H8M9 788 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 FAM172BPA6NC97 362 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 A6NCN8 305 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 CENPXA8MT69 81 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 H0YGG7 62 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 GABRPO00591 440 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 POLR1CO15160 346 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 CHP2O43745 196 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 IDH3BO43837 385 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 BRINP1O60477 761 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 NKX2-2O95096 273 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 STATHP02808 62 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 SLC35E2P0CK97 266 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 SLC2A2P11168 524 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 MAGP20916 626 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 CTHP32929 405 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 TRHRP34981 398 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 DDOSTP39656 456 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 GPR4P46093 362 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 GPR143P51810 404 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 ARF3P61204 181 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 PPP2CBP62714 309 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 ACTA2P62736 377 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 RPS25P62851 125 aaKnown RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 ACTG2P63267 376 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 PPP2CAP67775 309 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 SIM1P81133 766 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 SHC2P98077 582 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 MXD1Q05195 221 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 DUSP2Q05923 314 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 MAP4K2Q12851 820 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 ADAM15Q13444 863 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 RUNX2Q13950 521 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 GALEQ14376 348 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 SF3A2Q15428 464 aaKnown RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 GPR68Q15743 365 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 CCDC85BQ15834 202 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 GLYR1Q49A26 553 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 CLEC12AQ5QGZ9 265 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 EXOSC6Q5RKV6 272 aaKnown RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 MRPL2Q5T653 305 aaKnown RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 FHL5Q5TD97 284 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 BICRALQ6AI39 1079 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 FCRL6Q6DN72 434 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 SLC30A6Q6NXT4 461 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 NIPAL3Q6P499 406 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 FAM111BQ6SJ93 734 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 SMARCD3Q6STE5 483 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 PLET1Q6UQ28 207 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 COMTD1Q86VU5 262 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 CPOQ8IVL8 374 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 NKAIN4Q8IVV8 208 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 LAX1Q8IWV1 398 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 GALNT12Q8IXK2 581 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 FAM20CQ8IXL6 584 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 LNX2Q8N448 690 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 MS4A15Q8N5U1 240 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 OR4Q3Q8NH05 313 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 OR10G6Q8NH81 332 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 NEIL3Q8TAT5 605 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 GPBAR1Q8TDU6 330 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 TMEM255BQ8WV15 326 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 DNAJA4Q8WW22 397 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 PHYHIPQ92561 330 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 ERLEC1Q96DZ1 483 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 ZC3HAV1LQ96H79 300 aaKnown RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 FRMD6Q96NE9 622 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 FCRL4Q96PJ5 515 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 SECISBP2Q96T21 854 aaKnown RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 PHOX2BQ99453 314 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 GPA33Q99795 319 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 CTRCQ99895 268 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 MACROD1Q9BQ69 325 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 WFDC6Q9BQY6 131 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 LMF2Q9BU23 707 aaKnown RBP6.66□□□□□ -1.34
SPIDR-228ENST00000588781 KATNB1Q9BVA0 655 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 IFT27Q9BW83 186 aa6.66□□□□□ -1.34
SPIDR-228ENST00000588781 BARHL1Q9BZE3 327 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms