RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 LGALS13Q9UHV8 139 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 ATP6V1HQ9UI12 483 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 PROCRQ9UNN8 238 aa16.85■□□□□ 0.29
TRIM47-205ENST00000587774 C7orf72A4D263 438 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 TMEM114B3SHH9 223 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 SCDO00767 359 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 PEX11AO75192 247 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 HMGN2P05204 90 aaKnown RBP16.84■□□□□ 0.29
TRIM47-205ENST00000587774 CRYGSP22914 178 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 PSMA4P25789 261 aaKnown RBP16.84■□□□□ 0.29
TRIM47-205ENST00000587774 HOXC12P31275 282 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 SERPINB4P48594 390 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 PRIM2P49643 509 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 ZNF41P51814 821 aaPredicted RBP16.84■□□□□ 0.29
TRIM47-205ENST00000587774 LASP1Q14847 261 aaKnown RBP16.84■□□□□ 0.29
TRIM47-205ENST00000587774 CD226Q15762 336 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 LRIG3Q6UXM1 1119 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 CXorf67Q86X51 503 aaPredicted RBP16.84■□□□□ 0.29
TRIM47-205ENST00000587774 OR10D3Q8NH80 312 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 TCP10LQ8TDR4 215 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 ZBTB8AQ96BR9 441 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 PIK3IP1Q96FE7 263 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 PPP3R2Q96LZ3 170 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 C3orf30Q96M34 536 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 SLC39A3Q9BRY0 314 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 C1orf50Q9BV19 199 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 BTBD2Q9BX70 525 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 GSX1Q9H4S2 264 aaPredicted RBP16.84■□□□□ 0.29
TRIM47-205ENST00000587774 TMEM185BQ9H7F4 350 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 HHATLQ9HCP6 504 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 NEUROD4Q9HD90 331 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 BEX4Q9NWD9 120 aaPredicted RBP16.84■□□□□ 0.29
TRIM47-205ENST00000587774 STOML1Q9UBI4 398 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 CLEC4AQ9UMR7 237 aa16.84■□□□□ 0.29
TRIM47-205ENST00000587774 C16orf97H3BN30 126 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 TNFSF11O14788 317 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 SKAP2O75563 359 aaPredicted RBP16.83■□□□□ 0.28
TRIM47-205ENST00000587774 OPN1LWP04000 364 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 LAMP1P11279 417 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 HPGDP15428 266 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 MAPK1P28482 360 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 LCN1P31025 176 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 RPL3P39023 403 aaKnown RBP16.83■□□□□ 0.28
TRIM47-205ENST00000587774 VSNL1P62760 191 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 POU6F2P78424 691 aaPredicted RBP16.83■□□□□ 0.28
TRIM47-205ENST00000587774 ATP6AP1LQ52LC2 224 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 C22orf34Q6ZV56 151 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 MISPQ8IVT2 679 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 WDR75Q8IWA0 830 aaKnown RBP16.83■□□□□ 0.28
TRIM47-205ENST00000587774 HOMEZQ8IX15 550 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 ACTRT2Q8TDY3 377 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 NUDT8Q8WV74 236 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 CHMP6Q96FZ7 201 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 ZC3HAV1LQ96H79 300 aaKnown RBP16.83■□□□□ 0.28
TRIM47-205ENST00000587774 MARK4Q96L34 752 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 STACQ99469 402 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 PRRG4Q9BZD6 226 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 DUSP22Q9NRW4 184 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 EMC9Q9Y3B6 208 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 SNX8Q9Y5X2 465 aa16.83■□□□□ 0.28
TRIM47-205ENST00000587774 A0A1W2PQD3 144 aa16.82■□□□□ 0.28
TRIM47-205ENST00000587774 CXCL13O43927 109 aa16.82■□□□□ 0.28
TRIM47-205ENST00000587774 SS18L1O75177 396 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-205ENST00000587774 SLU7O95391 586 aaKnown RBP16.82■□□□□ 0.28
TRIM47-205ENST00000587774 PLGP00747 810 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-205ENST00000587774 FOSL1P15407 271 aa16.82■□□□□ 0.28
TRIM47-205ENST00000587774 DDX5P17844 614 aaKnown RBP16.82■□□□□ 0.28
TRIM47-205ENST00000587774 EXOC3L2Q2M3D2 409 aa16.82■□□□□ 0.28
TRIM47-205ENST00000587774 KRTAP21-3Q3LHN1 58 aa16.82■□□□□ 0.28
TRIM47-205ENST00000587774 OR6K3Q8NGY3 331 aa16.82■□□□□ 0.28
TRIM47-205ENST00000587774 POC1BQ8TC44 478 aa16.82■□□□□ 0.28
TRIM47-205ENST00000587774 GMPPAQ96IJ6 420 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-205ENST00000587774 HS3ST6Q96QI5 342 aa16.82■□□□□ 0.28
TRIM47-205ENST00000587774 PIGUQ9H490 435 aa16.82■□□□□ 0.28
TRIM47-205ENST00000587774 CXorf36Q9H7Y0 433 aa16.82■□□□□ 0.28
TRIM47-205ENST00000587774 PAQR5Q9NXK6 330 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-205ENST00000587774 ZDHHC2Q9UIJ5 367 aa16.82■□□□□ 0.28
TRIM47-205ENST00000587774 MCTS1Q9ULC4 181 aaKnown RBP16.82■□□□□ 0.28
TRIM47-205ENST00000587774 UQCRHLA0A096LP55 91 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 NPIPA5A0A0B4J1W7 369 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 NPIPA7E9PJI5 369 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 ADAMDEC1O15204 470 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 HSPA4LO95757 839 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 LINGO3P0C6S8 592 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 NPIPA8P0DM63 369 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 CREB1P16220 341 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 HOXB4P17483 251 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-205ENST00000587774 IL11P20809 199 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 RNF144AP50876 292 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-205ENST00000587774 RAC1P63000 192 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 NKX6-1P78426 367 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-205ENST00000587774 ZNF117Q03924 483 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 IFFO1Q0D2I5 559 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 FOXF1Q12946 379 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 TP53BP2Q13625 1128 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 C6orf136Q5SQH8 315 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 CPTPQ5TA50 214 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 ANKRD34AQ69YU3 496 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 CDC73Q6P1J9 531 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 ESPNLQ6ZVH7 1005 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms