RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 PEPDP12955 493 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 BMP7P18075 431 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 POU3F2P20265 443 aaPredicted RBP12.81□□□□□ -0.36
TPM4-205ENST00000586833 AGAP20933 346 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 ME2P23368 584 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 ADH7P40394 386 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 SF3A3Q12874 501 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■■■■■ 41.8
TPM4-205ENST00000586833 CBFBQ13951 182 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 RGNQ15493 299 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 BCL2A1Q16548 175 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 PDZK1Q5T2W1 519 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 GCNT6Q5T4J0 391 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 C1orf185Q5T7R7 199 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 PRAMEF8Q5VWM4 474 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 PRAMEF7Q5VXH5 474 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 TYW3Q6IPR3 259 aaKnown RBP12.81□□□□□ -0.36
TPM4-205ENST00000586833 CGB2Q6NT52 195 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 XKRXQ6PP77 449 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 CLEC18BQ6UXF7 455 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 FGD2Q7Z6J4 655 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 ZAR1Q86SH2 424 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 ZNF808Q8N4W9 903 aaPredicted RBP12.81□□□□□ -0.36
TPM4-205ENST00000586833 DPP10Q8N608 796 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 CLEC18CQ8NCF0 446 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 ASB5Q8WWX0 329 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 RND1Q92730 232 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 SH3YL1Q96HL8 342 aaPredicted RBP12.81□□□□□ -0.36
TPM4-205ENST00000586833 TIMP4Q99727 224 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 ELAC2Q9BQ52 826 aaKnown RBP12.81□□□□□ -0.36
TPM4-205ENST00000586833 UGT2B28Q9BY64 529 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 PRDM14Q9GZV8 571 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 FAM107BQ9H098 131 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 SAP130Q9H0E3 1048 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 SAR1AQ9NR31 198 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 PNPLA3Q9NST1 481 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 FBXO34Q9NWN3 711 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 GID8Q9NWU2 228 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 SPRR3Q9UBC9 169 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 PRDM4Q9UKN5 801 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 ZNF232Q9UNY5 417 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 RPH3AQ9Y2J0 694 aaPredicted RBP12.81□□□□□ -0.36
TPM4-205ENST00000586833 SLC6A5Q9Y345 797 aa12.81□□□□□ -0.36
TPM4-205ENST00000586833 NPIPA5A0A0B4J1W7 369 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 A0A0G2JPF8 293 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 HNRNPCL2B2RXH8 293 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 HNRNPCL3B7ZW38 293 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 NPIPA7E9PJI5 369 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 NPIPB9F8W1W9 429 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 H0Y3Z8 333 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 HNRNPCL1O60812 293 aaKnown RBP12.8□□□□□ -0.36
TPM4-205ENST00000586833 CYP7B1O75881 506 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 WISP2O76076 250 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 LDLRP01130 860 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 BCHEP06276 602 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 NPIPA8P0DM63 369 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 HNRNPCL4P0DMR1 293 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 ETFAP13804 333 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 CPN1P15169 458 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 IL7RP16871 459 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 PGCP20142 388 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 SLC6A8P48029 635 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 CCR4P51679 360 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 RPS3AP61247 264 aaKnown RBP12.8□□□□□ -0.36
TPM4-205ENST00000586833 CRYZQ08257 329 aaKnown RBP12.8□□□□□ -0.36
TPM4-205ENST00000586833 KLF10Q13118 480 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 LARS2Q15031 903 aaKnown RBP12.8□□□□□ -0.36
TPM4-205ENST00000586833 GTDC1Q4AE62 458 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 LIN52Q52LA3 116 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 PAGE3Q5JUK9 113 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 PDSS1Q5T2R2 415 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 AP1ARQ63HQ0 302 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 APOOLQ6UXV4 268 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 KRT73Q86Y46 540 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 CHERPQ8IWX8 916 aaKnown RBP12.8□□□□□ -0.36
TPM4-205ENST00000586833 BBS10Q8TAM1 723 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 WDR60Q8WVS4 1066 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 C10orf82Q8WW14 230 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 TMEM234Q8WY98 164 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 CCDC120Q96HB5 630 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 THUMPD3Q9BV44 507 aaKnown RBP12.8□□□□□ -0.36
TPM4-205ENST00000586833 SPATA5L1Q9BVQ7 753 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 LAT2Q9GZY6 243 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 A4GALTQ9NPC4 353 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 CARD8Q9Y2G2 431 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 IFT52Q9Y366 437 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 GMEB1Q9Y692 573 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 AP4B1Q9Y6B7 739 aa12.8□□□□□ -0.36
TPM4-205ENST00000586833 C7orf72A4D263 438 aa12.79□□□□□ -0.36
TPM4-205ENST00000586833 GJE1A6NN92 205 aa12.79□□□□□ -0.36
TPM4-205ENST00000586833 GMFGO60234 142 aa12.79□□□□□ -0.36
TPM4-205ENST00000586833 FCMRO60667 390 aa12.79□□□□□ -0.36
TPM4-205ENST00000586833 UGT2B17O75795 530 aa12.79□□□□□ -0.36
TPM4-205ENST00000586833 ADH6P28332 368 aa12.79□□□□□ -0.36
TPM4-205ENST00000586833 GFRA1P56159 465 aa12.79□□□□□ -0.36
TPM4-205ENST00000586833 CHRNEQ04844 493 aa12.79□□□□□ -0.36
TPM4-205ENST00000586833 FGFBP1Q14512 234 aa12.79□□□□□ -0.36
TPM4-205ENST00000586833 CD226Q15762 336 aa12.79□□□□□ -0.36
TPM4-205ENST00000586833 SYPL1Q16563 259 aa12.79□□□□□ -0.36
TPM4-205ENST00000586833 TRMT5Q32P41 509 aaKnown RBP12.79□□□□□ -0.36
TPM4-205ENST00000586833 COX20Q5RI15 118 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms