RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 ABCG2Q9UNQ0 655 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 LAMP3Q9UQV4 416 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 PTGDR2Q9Y5Y4 395 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 IGLV3-32A0A0A0MS00 114 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 SERTM1A2A2V5 107 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 HMGB1P1B2RPK0 211 aaPredicted RBP10.38□□□□□ -0.75
LIG3-207ENST00000586119 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 TM9SF1O15321 606 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 EFNA2O43921 213 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 OXSR1O95747 527 aaPredicted RBP10.38□□□□□ -0.75
LIG3-207ENST00000586119 ENO1P06733 434 aaKnown RBP10.38□□□□□ -0.75
LIG3-207ENST00000586119 ACP2P11117 423 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 PAX1P15863 534 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 EFNA1P20827 205 aaPredicted RBP10.38□□□□□ -0.75
LIG3-207ENST00000586119 PSMA4P25789 261 aaKnown RBP10.38□□□□□ -0.75
LIG3-207ENST00000586119 MAP3K8P41279 467 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 PKNOX1P55347 436 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 ATP5J2P56134 94 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 CTBP2P56545 445 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 PRR5P85299 388 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 HSPB3Q12988 150 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 LCP2Q13094 533 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 ZNF385BQ569K4 471 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 NOXRED1Q6NXP6 359 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 FIGNL1Q6PIW4 674 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 ZYG11AQ6WRX3 759 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 CXXC5Q7LFL8 322 aaKnown RBP10.38□□□□□ -0.75
LIG3-207ENST00000586119 NUFIP2Q7Z417 695 aaKnown RBP10.38□□□□□ -0.75
LIG3-207ENST00000586119 OR6K3Q8NGY3 331 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 GPR151Q8TDV0 419 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 TMEM171Q8WVE6 324 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 ZNF524Q96C55 264 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 L3HYPDHQ96EM0 354 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 DTNBP1Q96EV8 351 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 C16orf58Q96GQ5 468 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 SH3YL1Q96HL8 342 aaPredicted RBP10.38□□□□□ -0.75
LIG3-207ENST00000586119 ATP6V1G3Q96LB4 118 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 TMEM204Q9BSN7 226 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 ACTR6Q9GZN1 396 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 C12orf65Q9H3J6 166 aaKnown RBP10.38□□□□□ -0.75
LIG3-207ENST00000586119 MYNNQ9NPC7 610 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 MIEF1Q9NQG6 463 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 TAS2R7Q9NYW3 318 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 EMC9Q9Y3B6 208 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 CCL27Q9Y4X3 112 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 COL6A5A8TX70 2615 aa10.38□□□□□ -0.75
LIG3-207ENST00000586119 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 A0A1W2PRB8 838 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 G3V2L1 256 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 LINC01387J3KSC0 135 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 HS3ST1O14792 307 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 OIP5O43482 229 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 SS18L1O75177 396 aaPredicted RBP10.37□□□□□ -0.75
LIG3-207ENST00000586119 NDUFS7O75251 213 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 SPAG7O75391 227 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 SASH3O75995 380 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 SOX30O94993 753 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 PLGP00747 810 aaPredicted RBP10.37□□□□□ -0.75
LIG3-207ENST00000586119 SOD3P08294 240 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 MYL2P10916 166 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 CPA3P15088 417 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 CLK3P49761 638 aaKnown RBP10.37□□□□□ -0.75
LIG3-207ENST00000586119 DNAJB13P59910 316 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 PSPHP78330 225 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 KIAA0040Q15053 153 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 PLPPR5Q32ZL2 321 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 CCNJQ5T5M9 372 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 LSRQ86X29 649 aaPredicted RBP10.37□□□□□ -0.75
LIG3-207ENST00000586119 ZNF619Q8N2I2 560 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 ZNF611Q8N823 705 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 TCP10LQ8TDR4 215 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 HOXB13Q92826 284 aaPredicted RBP10.37□□□□□ -0.75
LIG3-207ENST00000586119 OSTF1Q92882 214 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 S100PBPQ96BU1 408 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 GIMAP5Q96F15 307 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 GMPPAQ96IJ6 420 aaPredicted RBP10.37□□□□□ -0.75
LIG3-207ENST00000586119 RNF145Q96MT1 663 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 MED17Q9NVC6 651 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 ZNF446Q9NWS9 450 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 CUBNO60494 3623 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 YLPM1P49750 1951 aaKnown RBP10.37□□□□□ -0.75
LIG3-207ENST00000586119 FBN3Q75N90 2809 aa10.37□□□□□ -0.75
LIG3-207ENST00000586119 ALG1L2C9J202 215 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 ADAMDEC1O15204 470 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 AKAP10O43572 662 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 NDUFB5O43674 189 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 CRLF1O75462 422 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 KCNK2O95069 426 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 NKX2-2O95096 273 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 PRPS2P11908 318 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 PTNP21246 168 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 NTSP30990 170 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 CDKN1AP38936 164 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 MAGOHP61326 146 aaKnown RBP10.36□□□□□ -0.75
LIG3-207ENST00000586119 RAC1P63000 192 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 OCRLQ01968 901 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 FGFBP1Q14512 234 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 ZNHIT3Q15649 155 aaPredicted RBP10.36□□□□□ -0.75
LIG3-207ENST00000586119 CD226Q15762 336 aa10.36□□□□□ -0.75
LIG3-207ENST00000586119 DUSP5Q16690 384 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms