RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ZNF311Q5JNZ3 666 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 B3GNTL1Q67FW5 361 aaPredicted RBP11.64□□□□□ -0.55
VMP1-202ENST00000585847 TYW3Q6IPR3 259 aaKnown RBP11.64□□□□□ -0.55
VMP1-202ENST00000585847 IZUMO2Q6UXV1 221 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 RANBP3LQ86VV4 465 aaPredicted RBP11.64□□□□□ -0.55
VMP1-202ENST00000585847 SLC44A2Q8IWA5 706 aaPredicted RBP11.64□□□□□ -0.55
VMP1-202ENST00000585847 C9orf40Q8IXQ3 194 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 TAGAPQ8N103 731 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 ARMC10Q8N2F6 343 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 FDCSPQ8NFU4 85 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 BRIX1Q8TDN6 353 aaKnown RBP11.64□□□□□ -0.55
VMP1-202ENST00000585847 APOBEC4Q8WW27 367 aaKnown RBP11.64□□□□□ -0.55
VMP1-202ENST00000585847 THOC3Q96J01 351 aaKnown RBP11.64□□□□□ -0.55
VMP1-202ENST00000585847 ARHGAP9Q9BRR9 750 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 OSBPL11Q9BXB4 747 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 ZNF552Q9H707 407 aaPredicted RBP11.64□□□□□ -0.55
VMP1-202ENST00000585847 NDUFAF4Q9P032 175 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 TESQ9UGI8 421 aaKnown RBP11.64□□□□□ -0.55
VMP1-202ENST00000585847 ACAD8Q9UKU7 415 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 CBLCQ9ULV8 474 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 RAB26Q9ULW5 256 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 SLC35A3Q9Y2D2 325 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 DTX4Q9Y2E6 619 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 LRCH1Q9Y2L9 728 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 C15orf41Q9Y2V0 281 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 ORC6Q9Y5N6 252 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 EXPH5Q8NEV8 1989 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 TRBV11-1A0A0K0K1C0 115 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 C2orf92A0A1B0GVN3 265 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 HTR3EA5X5Y0 456 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 G3V2T6 193 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 H3BNH8 94 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 K7EM74 188 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 OXSR1O95747 527 aaPredicted RBP11.63□□□□□ -0.55
VMP1-202ENST00000585847 UQCRBP14927 111 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 IL7RP16871 459 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 ADH7P40394 386 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 ERFP50548 548 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 ALDH3A2P51648 485 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 CCL11P51671 97 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 HMGA2P52926 109 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 RAD23AP54725 363 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 RRADP55042 308 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 VLDLRP98155 873 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 NFATC3Q12968 1075 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 EFR3AQ14156 821 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 NRF1Q16656 503 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 FLYWCH1Q4VC44 716 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 FCRLBQ6BAA4 426 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 HSDL2Q6YN16 418 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 C16orf47Q6ZP98 133 aaPredicted RBP11.63□□□□□ -0.55
VMP1-202ENST00000585847 VTCN1Q7Z7D3 282 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 MISPQ8IVT2 679 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 GALNT16Q8N428 558 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 SLC15A4Q8N697 577 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 FAM86B1Q8N7N1 296 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 ZNF441Q8N8Z8 693 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 OR52P1PQ8NH57 321 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 NRG4Q8WWG1 115 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 ADIPOR1Q96A54 375 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 DHRS1Q96LJ7 313 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 ZNF597Q96LX8 424 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 PRRC1Q96M27 445 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 ARHGDIGQ99819 225 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 ITPAQ9BY32 194 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 WWTR1Q9GZV5 400 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 LHPPQ9H008 270 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 LIN28AQ9H9Z2 209 aaKnown RBP11.63□□□□□ -0.55
VMP1-202ENST00000585847 ZBTB20Q9HC78 741 aaPredicted RBP11.63□□□□□ -0.55
VMP1-202ENST00000585847 KRCC1Q9NPI7 259 aaPredicted RBP11.63□□□□□ -0.55
VMP1-202ENST00000585847 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.63□□□□□ -0.55
VMP1-202ENST00000585847 OAZ3Q9UMX2 235 aa11.63□□□□□ -0.55
VMP1-202ENST00000585847 ZNF443Q9Y2A4 671 aaPredicted RBP11.63□□□□□ -0.55
VMP1-202ENST00000585847 NAV2Q8IVL1 2488 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 EML6Q6ZMW3 1958 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 A0A1W2PQD3 144 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 A0A1W2PRQ8 180 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 PRAMEF27A3QJZ7 478 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 A6NL46 340 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 TMEM229AB2RXF0 380 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 UGT2B17O75795 530 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 OR5F1O95221 314 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 NADKO95544 446 aaPredicted RBP11.62□□□□□ -0.55
VMP1-202ENST00000585847 IL33O95760 270 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 PDGFAP04085 211 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 ITGB2P05107 769 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 CT45A8P0DMV1 189 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 CT45A9P0DMV2 189 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 ZNF26P17031 533 aaPredicted RBP11.62□□□□□ -0.55
VMP1-202ENST00000585847 IFNGR2P38484 337 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 PNLIPRP2P54317 469 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 ATP12AP54707 1039 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 CASP9P55211 416 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 RNF4P78317 190 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 CHRNEQ04844 493 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 RAPSNQ13702 412 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 DAG1Q14118 895 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 DGCR6Q14129 220 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 CT45A2Q5DJT8 189 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 COLEC12Q5KU26 742 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms