RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	CLDN15	P56746	228 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	UFM1	P61960	85 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	PPP2R2A	P63151	447 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	SRY	Q05066	204 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	CD226	Q15762	336 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	BCL2A1	Q16548	175 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	FAM174B	Q3ZCQ3	159 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	TTMP	Q5BVD1	217 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	BHLHB9	Q6PI77	547 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	ARSK	Q6UWY0	536 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	SPATA19	Q7Z5L4	167 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	CHDH	Q8NE62	594 aa	Predicted RBP	12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	OR4A15	Q8NGL6	344 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	ADAMTS15	Q8TE58	950 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	ATP6V1G3	Q96LB4	118 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	SH3GL2	Q99962	352 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	GSX1	Q9H4S2	264 aa	Predicted RBP	12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	HHATL	Q9HCP6	504 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	CCM2L	Q9NUG4	571 aa	Predicted RBP	12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	KCNN3	Q9UGI6	736 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	GPR45	Q9Y5Y3	372 aa		12.02	□□□□□ -0.49
SREBF1-223	ENST00000584760	NPIPA5	A0A0B4J1W7	369 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	C7orf72	A4D263	438 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760		C9JVG2	144 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	NPIPA7	E9PJI5	369 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	LINC01387	J3KSC0	135 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	SCD	O00767	359 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	DVL2	O14641	736 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	GMFG	O60234	142 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	NPIPA8	P0DM63	369 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	PEPD	P12955	493 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	HPGD	P15428	266 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZNF17	P17021	662 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	ATP6V1C1	P21283	382 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	IL12A	P29459	219 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	ASCL1	P50553	236 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	DLX5	P56178	289 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	NME5	P56597	212 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	PLPPR5	Q32ZL2	321 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	FBXL19-AS1	Q494R0	122 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	GLYR1	Q49A26	553 aa	Predicted RBP	12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	SLC9B1	Q4ZJI4	515 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	ANXA8L1	Q5VT79	327 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	PLXDC2	Q6UX71	529 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	C6orf120	Q7Z4R8	191 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	MISP	Q8IVT2	679 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	OR5M1	Q8NGP8	315 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	GOT1L1	Q8NHS2	421 aa	Predicted RBP	12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	PIWIL2	Q8TC59	973 aa	Known RBP	12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	MIPOL1	Q8TD10	442 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZNF75CP	Q92670	426 aa	Predicted RBP	12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	WNT2B	Q93097	391 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	SLC35G5	Q96KT7	338 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZFP3	Q96NJ6	502 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	CCDC115	Q96NT0	180 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	FOXC2	Q99958	501 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	KLHDC3	Q9BQ90	382 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	PIGQ	Q9BRB3	760 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZNF337	Q9Y3M9	751 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	NAV3	Q8IVL0	2385 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	SPG11	Q96JI7	2443 aa		12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	NIPBL	Q6KC79	2804 aa	eCLIP	12.01	□□□□□ -0.49
SREBF1-223	ENST00000584760	SHISA8	B8ZZ34	492 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760		H0YC42	278 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760		H3BML4	177 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	RCBTB2	O95199	551 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	IL18BP	O95998	194 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	UQCRC2	P22695	453 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	CTSS	P25774	331 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	S100A3	P33764	101 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	DGKQ	P52824	942 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	SUCLG1	P53597	346 aa	Known RBP	12	□□□□□ -0.49
SREBF1-223	ENST00000584760	TPD52	P55327	224 aa	Predicted RBP	12	□□□□□ -0.49
SREBF1-223	ENST00000584760	FOXF2	Q12947	444 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	FLYWCH1	Q4VC44	716 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	KLHL26	Q53HC5	615 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	SAXO2	Q658L1	398 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	UBQLNL	Q8IYU4	475 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	12	□□□□□ -0.49
SREBF1-223	ENST00000584760	ZNF527	Q8NB42	609 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	ACTRT2	Q8TDY3	377 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	NEURL3	Q96EH8	262 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	SH3YL1	Q96HL8	342 aa	Predicted RBP	12	□□□□□ -0.49
SREBF1-223	ENST00000584760	SDF2	Q99470	211 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	NPAS1	Q99742	590 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	TM9SF2	Q99805	663 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	CXXC4	Q9H2H0	198 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	DNAJB12	Q9NXW2	375 aa	Known RBP	12	□□□□□ -0.49
SREBF1-223	ENST00000584760	BTNL2	Q9UIR0	455 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	PCDHGB4	Q9UN71	923 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	VDAC3	Q9Y277	283 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760	L3MBTL1	Q9Y468	752 aa		12	□□□□□ -0.49
SREBF1-223	ENST00000584760		A0A087WZY1	265 aa		11.99	□□□□□ -0.49
SREBF1-223	ENST00000584760	DUXA	A6NLW8	204 aa		11.99	□□□□□ -0.49
SREBF1-223	ENST00000584760	OIP5	O43482	229 aa		11.99	□□□□□ -0.49
SREBF1-223	ENST00000584760	TGM6	O95932	706 aa		11.99	□□□□□ -0.49
SREBF1-223	ENST00000584760	AK1	P00568	194 aa		11.99	□□□□□ -0.49
SREBF1-223	ENST00000584760	C1QC	P02747	245 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms