RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PRIM2P49643 509 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 PRKAG1P54619 331 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 RPS3AP61247 264 aaKnown RBP10.02□□□□□ -0.81
CCDC47-206ENST00000584112 VSNL1P62760 191 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 MLC1Q15049 377 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 PDCD2Q16342 344 aaPredicted RBP10.02□□□□□ -0.81
CCDC47-206ENST00000584112 GRAMD1BQ3KR37 738 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 ATP6AP1LQ52LC2 224 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 ZNF385BQ569K4 471 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 ARL13AQ5H913 290 aaPredicted RBP10.02□□□□□ -0.81
CCDC47-206ENST00000584112 EMBQ6PCB8 327 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 ZCCHC12Q6PEW1 402 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 LUZP2Q86TE4 346 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 MARCH3Q86UD3 253 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 UBQLNLQ8IYU4 475 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 GCNT2Q8N0V5 402 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 NATD1Q8N6N6 113 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 OR6Y1Q8NGX8 325 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 CLHC1Q8NHS4 586 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 TCP10LQ8TDR4 215 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 PIK3R3Q92569 461 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 SLC9A6Q92581 669 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 PIP5K1AQ99755 562 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 MECRQ9BV79 373 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 GALNT8Q9NY28 637 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 FLRT3Q9NZU0 649 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 SLC17A7Q9P2U7 560 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 BAIAP2L1Q9UHR4 511 aa10.02□□□□□ -0.81
CCDC47-206ENST00000584112 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 A0A1W2PNV4 684 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 GXYLT2A0PJZ3 443 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 OR2M5A3KFT3 312 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 A8MXE2 369 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 TMEM233B4DJY2 109 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 ALG1L2C9J202 215 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 RNF223E7ERA6 249 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 H3BML4 177 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 MSTNO14793 375 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 SCAMP2O15127 329 aaKnown RBP10.01□□□□□ -0.81
CCDC47-206ENST00000584112 NDUFB5O43674 189 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 SPAG7O75391 227 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 TNFRSF21O75509 655 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 ANGPTL1O95841 491 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 TGM6O95932 706 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 NGFRP08138 427 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 ALOX5P09917 674 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 HPGDP15428 266 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 SERPINB4P48594 390 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 OCRLQ01968 901 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 FGFBP1Q14512 234 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.01□□□□□ -0.81
CCDC47-206ENST00000584112 UGT3A2Q3SY77 523 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 XKR7Q5GH72 579 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 MFSD12Q6NUT3 480 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 WDR93Q6P2C0 686 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 COX18Q8N8Q8 333 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 LINC01560Q8TB33 94 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 AGR3Q8TD06 166 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 AENQ8WTP8 325 aaKnown RBP10.01□□□□□ -0.81
CCDC47-206ENST00000584112 JADE3Q92613 823 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 GIMAP5Q96F15 307 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 DACH2Q96NX9 599 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 YIPF4Q9BSR8 244 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 RTN4RQ9BZR6 473 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 ATAD3AQ9NVI7 634 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 NDRG3Q9UGV2 375 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 ATP6V1HQ9UI12 483 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 ZNF337Q9Y3M9 751 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 ZNF175Q9Y473 711 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 AP4B1Q9Y6B7 739 aa10.01□□□□□ -0.81
CCDC47-206ENST00000584112 ROS1P08922 2347 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 A0A087WZY1 265 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 TNFSF12-TNFSF13A0A0A6YY99 330 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 A0A1W2PRB8 838 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 A8MV72 311 aaPredicted RBP10□□□□□ -0.81
CCDC47-206ENST00000584112 SCDO00767 359 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 SEC14L5O43304 696 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 PEX11AO75192 247 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 LYPLA1O75608 230 aaPredicted RBP10□□□□□ -0.81
CCDC47-206ENST00000584112 TNFSF13O75888 250 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 SMNDC1O75940 238 aaKnown RBP eCLIP10□□□□□ -0.81
CCDC47-206ENST00000584112 SOX30O94993 753 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 KCNK2O95069 426 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 OXSR1O95747 527 aaPredicted RBP10□□□□□ -0.81
CCDC47-206ENST00000584112 IGKV1D-16P01601 117 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 HRGP04196 525 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 KRT16P08779 473 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 ACP2P11117 423 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 FCGR2AP12318 317 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 ZNF17P17021 662 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 TBXA2RP21731 343 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 PCYT1AP49585 367 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 LSM12Q3MHD2 195 aaKnown RBP10□□□□□ -0.81
CCDC47-206ENST00000584112 PLXDC2Q6UX71 529 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 ZCCHC23Q6ZST2 131 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 EXOC3L1Q86VI1 746 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 MISPQ8IVT2 679 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 CNEP1R1Q8N9A8 125 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 SLC16A11Q8NCK7 471 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 PPP1R14CQ8TAE6 165 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms