RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 GGNQ86UU5 652 aa19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 KIRREL3Q8IZU9 778 aa19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 OR5D16Q8NGK9 328 aa19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 LINC01560Q8TB33 94 aa19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 MGARPQ8TDB4 240 aa19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 DOCK7Q96N67 2140 aa19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 OR7D2Q96RA2 312 aa19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 GPATCH1Q9BRR8 931 aaKnown RBP19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 MEAF6Q9HAF1 191 aa19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 HHATLQ9HCP6 504 aa19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 MED17Q9NVC6 651 aa19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 DNAJB12Q9NXW2 375 aaKnown RBP19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 GALNT8Q9NY28 637 aa19.32■□□□□ 0.68
PPP4R1-228ENST00000584074 TUBAL3A6NHL2 446 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 ANKRD28O15084 1053 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 LBPP18428 481 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 CPA2P48052 419 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 PLPPR5Q32ZL2 321 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 KLHL26Q53HC5 615 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 OR2A2Q6IF42 318 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 C6orf120Q7Z4R8 191 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 MISPQ8IVT2 679 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 GTPBP8Q8N3Z3 284 aaPredicted RBP19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 OR8J2Q8NGG1 315 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 FNDC9Q8TBE3 224 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 ACTRT2Q8TDY3 377 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 PIGMQ9H3S5 423 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 SERHL2Q9H4I8 314 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 PACSIN3Q9UKS6 424 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 CCDC168Q8NDH2 2452 aa19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 ANKRD17O75179 2603 aaKnown RBP19.31■□□□□ 0.68
PPP4R1-228ENST00000584074 HRNRQ86YZ3 2850 aaPredicted RBP19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 A6NNC1 897 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 RNASET2O00584 256 aaKnown RBP19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 OIP5O43482 229 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 SOX30O94993 753 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 OPN1LWP04000 364 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 ZNF17P17021 662 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 PSMA4P25789 261 aaKnown RBP19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 ZNF41P51814 821 aaPredicted RBP19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 MAGOHP61326 146 aaKnown RBP19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 EEF1A1P68104 462 aaKnown RBP19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 PHC1P78364 1004 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 SORDQ00796 357 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 ZNF117Q03924 483 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 PON3Q15166 354 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 BEND6Q5SZJ8 279 aaPredicted RBP19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 EEF1A1P5Q5VTE0 462 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 BHLHB9Q6PI77 547 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 ANKRD46Q86W74 232 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 METTL25Q8N6Q8 603 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 CNEP1R1Q8N9A8 125 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 OR4A15Q8NGL6 344 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 B4GALNT2Q8NHY0 566 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 PHOSPHO1Q8TCT1 267 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 ZBTB8AQ96BR9 441 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 STARD4Q96DR4 205 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 RNF145Q96MT1 663 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 POLDIP3Q9BY77 421 aaKnown RBP19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 HOXD1Q9GZZ0 328 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 RASSF1Q9NS23 344 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 ZNF175Q9Y473 711 aa19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 ANKHD1Q8IWZ3 2542 aaKnown RBP19.3■□□□□ 0.68
PPP4R1-228ENST00000584074 RNF103-CHMP3A0A140T963 221 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 FAM221AA4D161 298 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 C7orf72A4D263 438 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 A8MXE2 369 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 EIF1AYO14602 144 aaKnown RBP19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 SCN2BO60939 215 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 ERLIN1O75477 346 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 SMNDC1O75940 238 aaKnown RBP eCLIP19.29■□□□□ 0.686e-7■■□□□ 13.7
PPP4R1-228ENST00000584074 CRHP06850 196 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 MATN1P21941 496 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 RPS3AP61247 264 aaKnown RBP19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 SGCBQ16585 318 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 VWA1Q6PCB0 445 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 ZNF527Q8NB42 609 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 POC1BQ8TC44 478 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 TESCQ96BS2 214 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 CLEC4MQ9H2X3 399 aaPredicted RBP19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 RNF122Q9H9V4 155 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 PCDHGB4Q9UN71 923 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 CARD8Q9Y2G2 431 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 PCNX3Q9H6A9 2034 aa19.29■□□□□ 0.68
PPP4R1-228ENST00000584074 PRSS51A0A1B0GVH4 220 aa19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 NPIPB9F8W1W9 429 aa19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 SDHDO14521 159 aa19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 SNNO75324 88 aaPredicted RBP19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 ALDOCP09972 364 aaKnown RBP19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 LINGO3P0C6S8 592 aa19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 EPXP11678 715 aa19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 DNAJA1P31689 397 aaKnown RBP19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 KIR2DL2P43627 348 aaPredicted RBP19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 EIF1AXP47813 144 aaKnown RBP19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 ATP12AP54707 1039 aa19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 CASP9P55211 416 aa19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 NME5P56597 212 aa19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 SIRPAP78324 504 aa19.28■□□□□ 0.68
PPP4R1-228ENST00000584074 DAZAP2Q15038 168 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms