RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 FOXF2Q12947 444 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 MYBPHQ13203 477 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 TMEM44Q2T9K0 475 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 SPANXN4Q5MJ08 99 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 AGBL2Q5U5Z8 902 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 ZNF527Q8NB42 609 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 OR5D16Q8NGK9 328 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 ACTRT2Q8TDY3 377 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 ARL8AQ96BM9 186 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 INTS12Q96CB8 462 aaKnown RBP17.6■□□□□ 0.41
SREBF1-220ENST00000581707 SH3YL1Q96HL8 342 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-220ENST00000581707 SFXN3Q9BWM7 321 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 ACBD3Q9H3P7 528 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 AIG1Q9NVV5 245 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 FOXD3Q9UJU5 478 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-220ENST00000581707 AP4B1Q9Y6B7 739 aa17.6■□□□□ 0.41
SREBF1-220ENST00000581707 CSMD2Q7Z408 3487 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 NPIPA5A0A0B4J1W7 369 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 GOLGA8QA0A0J9YX86 632 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 GOLGA8OA6NCC3 632 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 SHISA8B8ZZ34 492 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 EEF1E1-BLOC1S5C9J1V9 151 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 E9PBE3 544 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 NPIPA7E9PJI5 369 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 GOLGA8NF8WBI6 632 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 H0YC42 278 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 SEC14L5O43304 696 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 EEF1E1O43324 174 aaKnown RBP17.59■□□□□ 0.41
SREBF1-220ENST00000581707 TGM6O95932 706 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 NPIPA8P0DM63 369 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 S100A3P33764 101 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 SUCLG1P53597 346 aaKnown RBP17.59■□□□□ 0.41
SREBF1-220ENST00000581707 TPD52P55327 224 aaPredicted RBP17.59■□□□□ 0.41
SREBF1-220ENST00000581707 NME5P56597 212 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 CLDN15P56746 228 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 CLDN20P56880 219 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 KRTAP10-9P60411 292 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 UFM1P61960 85 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 CD226Q15762 336 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 FAM174BQ3ZCQ3 159 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 FLYWCH1Q4VC44 716 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 KLHL26Q53HC5 615 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 P4HA3Q7Z4N8 544 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 B4GALNT2Q8NHY0 566 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 PHOSPHO1Q8TCT1 267 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 SMPDL3BQ92485 455 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 SLC35G5Q96KT7 338 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 TEX37Q96LM6 180 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 STOML1Q9UBI4 398 aa17.59■□□□□ 0.41
SREBF1-220ENST00000581707 SLC22A20A6NK97 555 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 H3BNH8 94 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 TNFRSF21O75509 655 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 ZNF17P17021 662 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 CAPN3P20807 821 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 UQCRC2P22695 453 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 PEX19P40855 299 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 KIR2DL3P43628 341 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 ZNF41P51814 821 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-220ENST00000581707 ATP12AP54707 1039 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 SNTB1Q13884 538 aaKnown RBP17.58■□□□□ 0.4
SREBF1-220ENST00000581707 MTERF4Q7Z6M4 381 aaKnown RBP17.58■□□□□ 0.4
SREBF1-220ENST00000581707 GCNT2Q8N0V5 402 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 ZNF75CPQ92670 426 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-220ENST00000581707 SDF2Q99470 211 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 SERHL2Q9H4I8 314 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 MED17Q9NVC6 651 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 JKAMPQ9P055 326 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 GPR45Q9Y5Y3 372 aa17.58■□□□□ 0.4
SREBF1-220ENST00000581707 ANKRD17O75179 2603 aaKnown RBP17.57■□□□□ 0.4
SREBF1-220ENST00000581707 KLF11O14901 512 aa17.57■□□□□ 0.4
SREBF1-220ENST00000581707 RPS3AP61247 264 aaKnown RBP17.57■□□□□ 0.4
SREBF1-220ENST00000581707 EEF1A1P68104 462 aaKnown RBP17.57■□□□□ 0.4
SREBF1-220ENST00000581707 PLPPR5Q32ZL2 321 aa17.57■□□□□ 0.4
SREBF1-220ENST00000581707 EEF1A1P5Q5VTE0 462 aa17.57■□□□□ 0.4
SREBF1-220ENST00000581707 NXNQ6DKJ4 435 aa17.57■□□□□ 0.4
SREBF1-220ENST00000581707 OR2A2Q6IF42 318 aa17.57■□□□□ 0.4
SREBF1-220ENST00000581707 LURAP1LQ8IV03 231 aa17.57■□□□□ 0.4
SREBF1-220ENST00000581707 GTPBP8Q8N3Z3 284 aaPredicted RBP17.57■□□□□ 0.4
SREBF1-220ENST00000581707 CHDHQ8NE62 594 aaPredicted RBP17.57■□□□□ 0.4
SREBF1-220ENST00000581707 MIPOL1Q8TD10 442 aa17.57■□□□□ 0.4
SREBF1-220ENST00000581707 ZBTB8AQ96BR9 441 aa17.57■□□□□ 0.4
SREBF1-220ENST00000581707 PINK1Q9BXM7 581 aa17.57■□□□□ 0.4
SREBF1-220ENST00000581707 MPDZO75970 2070 aa17.57■□□□□ 0.4
SREBF1-220ENST00000581707 CCDC168Q8NDH2 2452 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 SPG11Q96JI7 2443 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 C7orf72A4D263 438 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 ENO4A6NNW6 628 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 NPIPB9F8W1W9 429 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 GTPBP1O00178 669 aaKnown RBP17.56■□□□□ 0.4
SREBF1-220ENST00000581707 AK1P00568 194 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 RNF144AP50876 292 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-220ENST00000581707 CASP9P55211 416 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 ZNF117Q03924 483 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 ARHGAP11BQ3KRB8 267 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.56■□□□□ 0.4
SREBF1-220ENST00000581707 GGNQ86UU5 652 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 KIF18BQ86Y91 864 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 ZNF614Q8N883 585 aa17.56■□□□□ 0.4
SREBF1-220ENST00000581707 PIWIL2Q8TC59 973 aaKnown RBP17.56■□□□□ 0.4
SREBF1-220ENST00000581707 FIG4Q92562 907 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 509.2 ms