RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.52□□□□□ -0.89
CCDC47-203ENST00000580986 BOD1L1Q8NFC6 3051 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 SERINC4A6NH21 518 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 EIF4E2O60573 245 aaKnown RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 TRIM3O75382 744 aaPredicted RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 GCM2O75603 506 aaPredicted RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 MFN2O95140 757 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 C8BP07358 591 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 PABPC4LP0CB38 370 aaKnown RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 IL7RP16871 459 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 ME2P23368 584 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 KDELR2P33947 212 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 RFX3P48380 749 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 SUMO3P55854 103 aaPredicted RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 TRAP1Q12931 704 aaKnown RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 TRIM25Q14258 630 aaKnown RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 GPR68Q15743 365 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 ZSCAN26Q16670 478 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 EIPR1Q53HC9 387 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 PDZK1Q5T2W1 519 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 C19orf48Q6RUI8 117 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 EIF3MQ7L2H7 374 aaKnown RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 IFNEQ86WN2 208 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF440Q8IYI8 595 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 EID3Q8N140 333 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 EXD3Q8N9H8 876 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 FAM98AQ8NCA5 519 aaKnown RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 OR2M7Q8NG81 312 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 WDR60Q8WVS4 1066 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 MCUR1Q96AQ8 359 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF597Q96LX8 424 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 DOHHQ9BU89 302 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 CADM1Q9BY67 442 aaKnown RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 OLAHQ9NV23 265 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 ANKRD10Q9NXR5 420 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 QPCTLQ9NXS2 382 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 PLA2G3Q9NZ20 509 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 KLRF1Q9NZS2 232 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 ACTR3BQ9P1U1 418 aa9.51□□□□□ -0.89
CCDC47-203ENST00000580986 BOKQ9UMX3 212 aaPredicted RBP9.51□□□□□ -0.89
CCDC47-203ENST00000580986 BSNQ9UPA5 3926 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 CDHR4A6H8M9 788 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 K7EM74 188 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 FAAHO00519 579 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 CXCR6O00574 342 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 NDUFB5O43674 189 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 GMNNO75496 209 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 ANGPTL1O95841 491 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 HOXB6P17509 224 aaKnown RBP9.5□□□□□ -0.89
CCDC47-203ENST00000580986 PGM1P36871 562 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 CD97P48960 835 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 CRYBA2P53672 197 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 EEF1A1P68104 462 aaKnown RBP9.5□□□□□ -0.89
CCDC47-203ENST00000580986 KCNJ10P78508 379 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 FOXO1Q12778 655 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 GANABQ14697 944 aaKnown RBP9.5□□□□□ -0.89
CCDC47-203ENST00000580986 MAPK14Q16539 360 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 RPS26P11Q5JNZ5 115 aaPredicted RBP9.5□□□□□ -0.89
CCDC47-203ENST00000580986 SLC6A19Q695T7 634 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 LCN8Q6JVE9 175 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 PCSK4Q6UW60 755 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 APOOLQ6UXV4 268 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 ARMC8Q8IUR7 673 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 ULK2Q8IYT8 1036 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 FADS6Q8N9I5 356 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 OR5M3Q8NGP4 307 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 OR52P1PQ8NH57 321 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 ZG16BQ96DA0 208 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 THTPAQ9BU02 230 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 PINK1Q9BXM7 581 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 DEPPQ9NTK1 212 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 FLRT3Q9NZU0 649 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 SEC14L3Q9UDX4 400 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 BAG5Q9UL15 447 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF443Q9Y2A4 671 aaPredicted RBP9.5□□□□□ -0.89
CCDC47-203ENST00000580986 MRPS18CQ9Y3D5 142 aaKnown RBP9.5□□□□□ -0.89
CCDC47-203ENST00000580986 CSAG2Q9Y5P2 127 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 EPG5Q9HCE0 2579 aa9.5□□□□□ -0.89
CCDC47-203ENST00000580986 CENPVL1A0A0U1RR11 272 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 M0QX08 132 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 ETV2O00321 342 aaPredicted RBP9.49□□□□□ -0.89
CCDC47-203ENST00000580986 ACOT8O14734 319 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 GSTA4O15217 222 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 ATXN7O15265 892 aaPredicted RBP9.49□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF264O43296 627 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 PEX1O43933 1283 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 GLSO94925 669 aaPredicted RBP9.49□□□□□ -0.89
CCDC47-203ENST00000580986 CSTAP01040 98 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 UBL4AP11441 157 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 SLC6A8P48029 635 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 KCNJ5P48544 419 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 P2RX1P51575 399 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 DLX5P56178 289 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 KCNJ2P63252 427 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 KLRB1Q12918 225 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 SKP2Q13309 424 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 CD226Q15762 336 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF311Q5JNZ3 666 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms