RNA–Protein interactions for RNA: ENST00000579451.1

PSMD11-208, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-208	ENST00000579451	PDSS1	Q5T2R2	415 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZAR1	Q86SH2	424 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	STK32C	Q86UX6	486 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	WFDC8	Q8IUA0	241 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	MISP	Q8IVT2	679 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZNF611	Q8N823	705 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	GATS	Q8NAP1	163 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	SLC16A11	Q8NCK7	471 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	OR6Y1	Q8NGX8	325 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	OR2V1	Q8NHB1	315 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	RNF145	Q96MT1	663 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	MS4A4E	Q96PG1	132 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	MDFI	Q99750	246 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	ACTR6	Q9GZN1	396 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	REEP4	Q9H6H4	257 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	LRTM1	Q9HBL6	345 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	C1orf109	Q9NX04	203 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	SLC28A1	O00337	649 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	RGS14	O43566	566 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	TUBB	P07437	444 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	ME2	P23368	584 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	AGTR1	P30556	359 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	MANF	P55145	182 aa	Known RBP	13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	DUSP5	Q16690	384 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	HBM	Q6B0K9	141 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	CLEC6A	Q6EIG7	209 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	GTF2IRD2B	Q6EKJ0	949 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	MFSD12	Q6NUT3	480 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZCCHC12	Q6PEW1	402 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	FIGNL1	Q6PIW4	674 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	SZRD1	Q7Z422	152 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	GTF2IRD2	Q86UP8	949 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	IFT20	Q8IY31	132 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	FBXO30	Q8TB52	745 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	POC1B	Q8TC44	478 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	PPCDC	Q96CD2	204 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	FCRL1	Q96LA6	429 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	CCT7	Q99832	543 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	TXLNGY	Q9BZA5	131 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	C12orf49	Q9H741	205 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	TMEM185B	Q9H7F4	350 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	UBQLN4	Q9NRR5	601 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	OXSM	Q9NWU1	459 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451	FBN3	Q75N90	2809 aa		13.54	□□□□□ -0.24
PSMD11-208	ENST00000579451		A0A1W2PQD3	144 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	SCD	O00767	359 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	AKAP10	O43572	662 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	PLIN3	O60664	434 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	NID1	P14543	1247 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	HPGD	P15428	266 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	SDC1	P18827	310 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	SERPINB4	P48594	390 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	ATP5J2	P56134	94 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	PDE7A	Q13946	482 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	CAPRIN1	Q14444	709 aa	Known RBP	13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	EXOSC6	Q5RKV6	272 aa	Known RBP	13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	RNF165	Q6ZSG1	346 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451		Q6ZSR9	355 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	TRABD2A	Q86V40	505 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	LILRA2	Q8N149	483 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	STEAP2	Q8NFT2	490 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	B4GALNT2	Q8NHY0	566 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	OSTF1	Q92882	214 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	KLHL15	Q96M94	604 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	TSSK3	Q96PN8	268 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	KLHDC3	Q9BQ90	382 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	FBXO34	Q9NWN3	711 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	SH3BP4	Q9P0V3	963 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	PTGDR2	Q9Y5Y4	395 aa		13.53	□□□□□ -0.24
PSMD11-208	ENST00000579451	MXRA5	Q9NR99	2828 aa		13.52	□□□□□ -0.24
PSMD11-208	ENST00000579451	SOX30	O94993	753 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	HSPA4L	O95757	839 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	ALOX5	P09917	674 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	LINGO3	P0C6S8	592 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	FAM153B	P0C7A2	387 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	PABPC4L	P0CB38	370 aa	Known RBP	13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	CPA3	P15088	417 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	EIF1	P41567	113 aa	Known RBP	13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	CCT5	P48643	541 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	PRIM2	P49643	509 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	CARD18	P57730	90 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	ZNF844	Q08AG5	666 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	CD226	Q15762	336 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	FAM153C	Q494X1	144 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	RFTN2	Q52LD8	501 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	CCNJ	Q5T5M9	372 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	ADAM5	Q6NVV9	412 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	COX18	Q8N8Q8	333 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	LRRN4CL	Q8ND94	238 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	OR2T11	Q8NH01	316 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	RNF128	Q8TEB7	428 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	ROBO4	Q8WZ75	1007 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	S100PBP	Q96BU1	408 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	C16orf58	Q96GQ5	468 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	HDHD5	Q9BXW7	423 aa		13.52	□□□□□ -0.25
PSMD11-208	ENST00000579451	COL6A5	A8TX70	2615 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms