RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 HOXB9P17482 250 aaPredicted RBP17.5■□□□□ 0.39
SS18-208ENST00000577751 HK1P19367 917 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 MDH1P40925 334 aaKnown RBP17.5■□□□□ 0.39
SS18-208ENST00000577751 LHX2P50458 406 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 BCL2A1Q16548 175 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 TMEM44Q2T9K0 475 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 COX20Q5RI15 118 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 METTL21CQ5VZV1 264 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 CGB2Q6NT52 195 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 SLC2A7Q6PXP3 512 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 SEM1Q6ZVN7 128 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 OIT3Q8WWZ8 545 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 ROPN1LQ96C74 230 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 SPDL1Q96EA4 605 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 PAIP1Q9H074 479 aaKnown RBP17.5■□□□□ 0.39
SS18-208ENST00000577751 RABEP2Q9H5N1 569 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 FGFR1OP2Q9NVK5 253 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 COQ3Q9NZJ6 369 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 MKLN1Q9UL63 735 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 TRIM33Q9UPN9 1127 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 CAMK2AQ9UQM7 478 aa17.5■□□□□ 0.39
SS18-208ENST00000577751 UTP20O75691 2785 aaKnown RBP17.5■□□□□ 0.39
SS18-208ENST00000577751 LINC01387J3KSC0 135 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 UGT2B17O75795 530 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 ANP32DO95626 131 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 CD1EP15812 388 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 ZNF708P17019 499 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 CAPN3P20807 821 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 STARP49675 285 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 ANXA11P50995 505 aaKnown RBP17.49■□□□□ 0.39
SS18-208ENST00000577751 SF3B4Q15427 424 aaKnown RBP eCLIP17.49■□□□□ 0.39
SS18-208ENST00000577751 GPR68Q15743 365 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 ZNF630Q2M218 657 aaPredicted RBP17.49■□□□□ 0.39
SS18-208ENST00000577751 GTDC1Q4AE62 458 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 ACSF3Q4G176 576 aaPredicted RBP17.49■□□□□ 0.39
SS18-208ENST00000577751 AGKQ53H12 422 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 TYW3Q6IPR3 259 aaKnown RBP17.49■□□□□ 0.39
SS18-208ENST00000577751 ARSKQ6UWY0 536 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 DNAJC14Q6Y2X3 702 aaPredicted RBP17.49■□□□□ 0.39
SS18-208ENST00000577751 OLIG3Q7RTU3 272 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 B4GALNT2Q8NHY0 566 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 PNPT1Q8TCS8 783 aaKnown RBP17.49■□□□□ 0.39
SS18-208ENST00000577751 PHOSPHO1Q8TCT1 267 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 ZPLD1Q8TCW7 415 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 SDCCAG3Q96C92 435 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 TPT1P8Q9HAU6 139 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 ICAM5Q9UMF0 924 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 LIPT1Q9Y234 373 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 RNF6Q9Y252 685 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 WDR45Q9Y484 360 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 PCDHB14Q9Y5E9 798 aa17.49■□□□□ 0.39
SS18-208ENST00000577751 KLF2Q9Y5W3 355 aaPredicted RBP17.49■□□□□ 0.39
SS18-208ENST00000577751 A0A087WZY1 265 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 A0A096LPI6 279 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 OR2M5A3KFT3 312 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 KDM4EB2RXH2 506 aaPredicted RBP17.48■□□□□ 0.39
SS18-208ENST00000577751 H3BNH8 94 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 GMFGO60234 142 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 KIAA0513O60268 411 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 CLDN14O95500 239 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 VIMP08670 466 aaKnown RBP17.48■□□□□ 0.39
SS18-208ENST00000577751 TROVE2P10155 538 aaKnown RBP eCLIP17.48■□□□□ 0.39
SS18-208ENST00000577751 NCF2P19878 526 aaPredicted RBP17.48■□□□□ 0.39
SS18-208ENST00000577751 ADH7P40394 386 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 CLDN18P56856 261 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 ZNF117Q03924 483 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 C6orf10Q5SRN2 563 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 PDZK1Q5T2W1 519 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 LRIF1Q5T3J3 769 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 CBLN3Q6UW01 205 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 FRRS1Q6ZNA5 592 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 ADGRE4PQ86SQ3 457 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 SH3YL1Q96HL8 342 aaPredicted RBP17.48■□□□□ 0.39
SS18-208ENST00000577751 KLHDC3Q9BQ90 382 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 PIGQQ9BRB3 760 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 TMEM120AQ9BXJ8 343 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 ZNF337Q9Y3M9 751 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 KIAA1549Q9HCM3 1950 aa17.48■□□□□ 0.39
SS18-208ENST00000577751 A0A0G2JNJ9 132 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 CENPVL1A0A0U1RR11 272 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 A0A1W2PP18 115 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 C7orf72A4D263 438 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 SERINC4A6NH21 518 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 CD8B2A6NJW9 211 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 NR5A2O00482 541 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 OIP5O43482 229 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 HCRTR2O43614 444 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 TOXO94900 526 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 PEPDP12955 493 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 TCEA1P23193 301 aaKnown RBP17.47■□□□□ 0.39
SS18-208ENST00000577751 CHRNB4P30926 498 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 TIMP3P35625 211 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 P2RX1P51575 399 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 CHRNEQ04844 493 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 MAPK11Q15759 364 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 MAPK14Q16539 360 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 SYPL1Q16563 259 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 PAGE3Q5JUK9 113 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 RIPPLY2Q5TAB7 128 aa17.47■□□□□ 0.39
SS18-208ENST00000577751 RAET1LQ5VY80 246 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms