RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 GSTM5P46439 218 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 KRT6CP48668 564 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 NCBP2P52298 156 aaKnown RBP eCLIP8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 CASP9P55211 416 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 C21orf58P58505 322 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 RNPS1Q15287 305 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 TRADDQ15628 312 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 ZNF239Q16600 458 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 SPIN4Q56A73 249 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 TMEM201Q5SNT2 666 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 PDSS1Q5T2R2 415 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 AGAP6Q5VW22 663 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 C11orf71Q6IPW1 123 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 ZDHHC24Q6UX98 284 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 TRABD2AQ86V40 505 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 LILRA2Q8N149 483 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 CDYL2Q8N8U2 506 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 ABHD3Q8WU67 409 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 SLC9A6Q92581 669 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 KLHDC3Q9BQ90 382 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 POTEKPQ9BYX7 375 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 GLIPR2Q9H4G4 154 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 TMEM185BQ9H7F4 350 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 HHATLQ9HCP6 504 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 MED17Q9NVC6 651 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 KLHL13Q9P2N7 655 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 GRID1Q9ULK0 1009 aa8.84□□□□□ -0.99
CALCOCO2-227ENST00000575560 FREM1Q5H8C1 2179 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 TTC36A6NLP5 189 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 A8MT66 165 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 NDUFB5O43674 189 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 PRKD3O94806 890 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 KCNH1O95259 989 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 OXSR1O95747 527 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 ANXA4P09525 319 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 IFI6P09912 130 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 LINGO3P0C6S8 592 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 SLC25A16P16260 332 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 PTNP21246 168 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 ME2P23368 584 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 SHC1P29353 583 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 TIA1P31483 386 aaKnown RBP eCLIP8.83□□□□□ -12e-11■■□□□ 11.6
CALCOCO2-227ENST00000575560 RFX3P48380 749 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 NUDT6P53370 316 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 MANFP55145 182 aaKnown RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 SRSF2Q01130 221 aaKnown RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 CLCQ05315 142 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 SLC18A2Q05940 514 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 ACSM2AQ08AH3 577 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 C2orf80Q0P641 193 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 SLC29A2Q14542 456 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 RASA2Q15283 850 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 ZNHIT3Q15649 155 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 UAP1Q16222 522 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 TSNAXIP1Q2TAA8 658 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 GLE1Q53GS7 698 aaKnown RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 ACSM2BQ68CK6 577 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 CYB5R2Q6BCY4 276 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 FAM71E1Q6IPT2 247 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 CLEC2AQ6UVW9 174 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 Q6ZT83 130 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 BHLHA15Q7RTS1 189 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 TDRPQ86YL5 185 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 ARIH2OSQ8N7S6 290 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 BANPQ8N9N5 519 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 SPATA4Q8NEY3 305 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 FAM110BQ8TC76 370 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 PIK3R3Q92569 461 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 CPNE4Q96A23 557 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 ADAD1Q96M93 576 aaKnown RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 KLHL15Q96M94 604 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 AMDHD1Q96NU7 426 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 ZNF382Q96SR6 550 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 MRPL57Q9BQC6 102 aaKnown RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 CACNG6Q9BXT2 260 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 SRXN1Q9BYN0 137 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 SHARPINQ9H0F6 387 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 MRPL46Q9H2W6 279 aaKnown RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 C3orf14Q9HBI5 128 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 DDX18Q9NVP1 670 aaKnown RBP8.83□□□□□ -1
CALCOCO2-227ENST00000575560 NFU1Q9UMS0 254 aa8.83□□□□□ -1
CALCOCO2-227ENST00000575560 SERTM1A2A2V5 107 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 E7EQL1 145 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 ABCD4O14678 606 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 DLX3O60479 287 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 LMX1BO60663 402 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 NKX2-2O95096 273 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 PGM3O95394 542 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 IGHV4-31P0DP07 118 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 TTKP33981 857 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 HTR6P50406 440 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 ZNF41P51814 821 aaPredicted RBP8.82□□□□□ -1
CALCOCO2-227ENST00000575560 CDH11P55287 796 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 GNG11P61952 73 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 PPA1Q15181 289 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 UNC50Q53HI1 259 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 Q6ZSR9 355 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 CEP112Q8N8E3 955 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 METTL6Q8TCB7 284 aa8.82□□□□□ -1
CALCOCO2-227ENST00000575560 GPR151Q8TDV0 419 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms