RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 RPSAP08865 295 aaKnown RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 PPIAL4FP0DN26 164 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 CTSAP10619 480 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 CCNB1P14635 433 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 POU2F1P14859 743 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 ETS2P15036 469 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 ARSBP15848 533 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 ZNF23P17027 643 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 GSTM3P21266 225 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 GPX3P22352 226 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 RORAP35398 523 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 RPL3P39023 403 aaKnown RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 SLC1A4P43007 532 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 NDST2P52849 883 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 MAGOHP61326 146 aaKnown RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 YWHAGP61981 247 aaKnown RBP eCLIP4.4□□□□□ -1.71
TSR1-203ENST00000575049 PITX1P78337 314 aaPredicted RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 MRPS25P82663 173 aaKnown RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 IRF8Q02556 426 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 LRRC63Q05C16 580 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 MFGE8Q08431 387 aaPredicted RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 ZNF177Q13360 481 aaPredicted RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 ILKQ13418 452 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 MEF2DQ14814 521 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 Q4G0T1 1027 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 SLC25A25Q6KCM7 469 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 TTC23LQ6PF05 361 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 TMEM64Q6YI46 380 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 DPY19L2P2Q6ZN68 376 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 C1QL2Q7Z5L3 287 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 GPBP1Q86WP2 473 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 VRK2Q86Y07 508 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 TGIF2LXQ8IUE1 241 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 NKAIN4Q8IVV8 208 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 RCOR2Q8IZ40 523 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 PARP8Q8N3A8 854 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 PQLC3Q8N755 202 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 SLC44A5Q8NCS7 719 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 OR4D5Q8NGN0 318 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 SPATA22Q8NHS9 363 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 NDNFQ8TB73 568 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 NANPQ8TBE9 248 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 ZNF596Q8TC21 504 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 CD300LFQ8TDQ1 290 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 AGAP11Q8TF27 550 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 PIGTQ969N2 578 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 SLC35C1Q96A29 364 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 MAGOHBQ96A72 148 aaKnown RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 ZNF778Q96MU6 729 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 UHRF2Q96PU4 802 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 RIT2Q99578 217 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 CCM2Q9BSQ5 444 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 TRAF4Q9BUZ4 470 aaPredicted RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 TSSK1BQ9BXA7 367 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 BBS2Q9BXC9 721 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 NSRP1Q9H0G5 558 aaKnown RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 NARFLQ9H6Q4 476 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 POLE4Q9NR33 117 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 NRBP2Q9NSY0 501 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 PTTG3PQ9NZH4 202 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 MTCH1Q9NZJ7 389 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 STX18Q9P2W9 335 aaKnown RBP4.4□□□□□ -1.71
TSR1-203ENST00000575049 RNF6Q9Y252 685 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 PPIAL4AQ9Y536 164 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 LRRC42Q9Y546 428 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 TJP1Q07157 1748 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 AFF2P51816 1311 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 LTN1O94822 1766 aa4.4□□□□□ -1.71
TSR1-203ENST00000575049 ECM29Q5VYK3 1845 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 TRAV6A0A075B6T7 132 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 LOC390937A0A1W2PQ73 354 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 RSPH10B2B2RC85 870 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 HHLA1C9JL84 531 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 PGRMC1O00264 195 aaKnown RBP4.39□□□□□ -1.71
TSR1-203ENST00000575049 WWP2O00308 870 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 PRKRAO75569 313 aaKnown RBP4.39□□□□□ -1.71
TSR1-203ENST00000575049 CBR3O75828 277 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 OR2F2O95006 317 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 PLEKHA8P1O95397 391 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 H6PDO95479 791 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 MT-ND2P03891 347 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 ERCC1P07992 297 aaPredicted RBP4.39□□□□□ -1.71
TSR1-203ENST00000575049 RSPH10BP0C881 870 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 GP1BBP13224 206 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 PRF1P14222 555 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 ACKR3P25106 362 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 LCN1P31025 176 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 OTX1P32242 354 aaPredicted RBP4.39□□□□□ -1.71
TSR1-203ENST00000575049 MATKP42679 507 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 HTR5AP47898 357 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 ISL1P61371 349 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 NCALDP61601 193 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 ORC2Q13416 577 aaPredicted RBP4.39□□□□□ -1.71
TSR1-203ENST00000575049 ITGA9Q13797 1035 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 TRIP6Q15654 476 aaKnown RBP4.39□□□□□ -1.71
TSR1-203ENST00000575049 ETFDHQ16134 617 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 SGSM1Q2NKQ1 1148 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 GPR33Q49SQ1 333 aa4.39□□□□□ -1.71
TSR1-203ENST00000575049 SBK1Q52WX2 424 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms