RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 MED17Q9NVC6 651 aa10.19□□□□□ -0.78
RPAIN-214ENST00000574003 EIF3LQ9Y262 564 aaKnown RBP10.19□□□□□ -0.78
RPAIN-214ENST00000574003 C2CD3Q4AC94 2353 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 CENPVL1A0A0U1RR11 272 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 A8MXE2 369 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 C9JVG2 144 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 EIF1AYO14602 144 aaKnown RBP10.18□□□□□ -0.78
RPAIN-214ENST00000574003 EPXP11678 715 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 SLC1A6P48664 564 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 NME5P56597 212 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 CLDN8P56748 225 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 PHC1P78364 1004 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 EMX2Q04743 252 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 TOMM34Q15785 309 aaPredicted RBP10.18□□□□□ -0.78
RPAIN-214ENST00000574003 PLPPR5Q32ZL2 321 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 TNFAIP8L3Q5GJ75 292 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.18□□□□□ -0.78
RPAIN-214ENST00000574003 CBLN3Q6UW01 205 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 KIF18BQ86Y91 864 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 MGARPQ8TDB4 240 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 ADAMTS15Q8TE58 950 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 LRRC46Q96FV0 321 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 OR7D2Q96RA2 312 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 PIGQQ9BRB3 760 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 ACTRT3Q9BYD9 372 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 NUF2Q9BZD4 464 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 PIGUQ9H490 435 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 SLC24A3Q9HC58 644 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 UBQLN4Q9NRR5 601 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 FOXD3Q9UJU5 478 aaPredicted RBP10.18□□□□□ -0.78
RPAIN-214ENST00000574003 PACSIN3Q9UKS6 424 aa10.18□□□□□ -0.78
RPAIN-214ENST00000574003 ZNF469Q96JG9 3925 aaPredicted RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 FREM1Q5H8C1 2179 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 A0A0J9YW62 118 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 ESPNB1AK53 854 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 SCDO00767 359 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 TNFSF11O14788 317 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 BIRC5O15392 142 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 EFNA2O43921 213 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 CXCL13O43927 109 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 TNFRSF21O75509 655 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 CPSF4O95639 269 aaKnown RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 NGFRP08138 427 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 HPGDP15428 266 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 PSMA4P25789 261 aaKnown RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 RPL3P39023 403 aaKnown RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 EIF1AXP47813 144 aaKnown RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 WDR4P57081 412 aaKnown RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 ZNF117Q03924 483 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 BST1Q10588 318 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 FOXF1Q12946 379 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 STX3Q13277 289 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 DAZAP2Q15038 168 aaPredicted RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 SGCBQ16585 318 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 CTU2Q2VPK5 515 aaKnown RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 GLYR1Q49A26 553 aaPredicted RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 DCST2Q5T1A1 773 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 FBXW10Q5XX13 1052 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 ZCCHC12Q6PEW1 402 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 C22orf34Q6ZV56 151 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 ZNF550Q7Z398 422 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 HMGN2P46Q86SG4 172 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 METTL25Q8N6Q8 603 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 ZNF614Q8N883 585 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 OR56A1Q8NGH5 318 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 OR10D3Q8NH80 312 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 GOT1L1Q8NHS2 421 aaPredicted RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 B4GALNT2Q8NHY0 566 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 RFWD2Q8NHY2 731 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 PSMA8Q8TAA3 256 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 PHOSPHO1Q8TCT1 267 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 DTNBP1Q96EV8 351 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 PGM2Q96G03 612 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 ZFP3Q96NJ6 502 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 STACQ99469 402 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 BHLHE41Q9C0J9 482 aaPredicted RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 NOP53Q9NZM5 478 aaKnown RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 ST6GALNAC2Q9UJ37 374 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 FAF1Q9UNN5 650 aaPredicted RBP10.17□□□□□ -0.78
RPAIN-214ENST00000574003 CARD8Q9Y2G2 431 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 RAP2CQ9Y3L5 183 aa10.17□□□□□ -0.78
RPAIN-214ENST00000574003 MAP1AP78559 2803 aaPredicted RBP10.16□□□□□ -0.78
RPAIN-214ENST00000574003 SH3D21A4FU49 640 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 TM9SF1O15321 606 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 SIAH2O43255 324 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 SCN2BO60939 215 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 CGAP01215 116 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 HRGP04196 525 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 MYZAPP0CAP1 466 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 PRPS1L1P21108 318 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 ATP6V1C1P21283 382 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 CCKARP32238 428 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 SFTPDP35247 375 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 RPL14P50914 215 aaKnown RBP10.16□□□□□ -0.78
RPAIN-214ENST00000574003 SORDQ00796 357 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 EXOC3L2Q2M3D2 409 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 LSM12Q3MHD2 195 aaKnown RBP10.16□□□□□ -0.78
RPAIN-214ENST00000574003 ANKRD34AQ69YU3 496 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 C6orf120Q7Z4R8 191 aa10.16□□□□□ -0.78
RPAIN-214ENST00000574003 GTPBP8Q8N3Z3 284 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms