RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 DPP4P27487 766 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 ADH7P40394 386 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 MVDP53602 400 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 CRISP3P54108 245 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 PER3P56645 1201 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 RIPPLY3P57055 190 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 HSF1Q00613 529 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 SYPL1Q16563 259 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 ZNF630Q2M218 657 aaPredicted RBP10.03□□□□□ -0.8
CHD3-216ENST00000573936 RUNDC3AQ59EK9 446 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 NHSL2Q5HYW2 709 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 WLSQ5T9L3 541 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 OR5M10Q6IEU7 315 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 TYW3Q6IPR3 259 aaKnown RBP10.03□□□□□ -0.8
CHD3-216ENST00000573936 MTFR2Q6P444 385 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 APOOLQ6UXV4 268 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 DLEU7Q6UYE1 221 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 MTDHQ86UE4 582 aaKnown RBP10.03□□□□□ -0.8
CHD3-216ENST00000573936 ZNF619Q8N2I2 560 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 METTL25Q8N6Q8 603 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 PCYOX1LQ8NBM8 494 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 OR2M3Q8NG83 312 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 OR14L1PQ8NHC6 308 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 B4GALNT2Q8NHY0 566 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 RP9Q8TA86 221 aaKnown RBP10.03□□□□□ -0.8
CHD3-216ENST00000573936 PHOSPHO1Q8TCT1 267 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 RELTQ969Z4 430 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 AURKBQ96GD4 344 aaPredicted RBP10.03□□□□□ -0.8
CHD3-216ENST00000573936 CGREF1Q99674 301 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 RUBCNLQ9H714 662 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 MTHFD2LQ9H903 347 aaPredicted RBP10.03□□□□□ -0.8
CHD3-216ENST00000573936 CACYBPQ9HB71 228 aaKnown RBP10.03□□□□□ -0.8
CHD3-216ENST00000573936 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.03□□□□□ -0.8
CHD3-216ENST00000573936 GID8Q9NWU2 228 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 TAS2R10Q9NYW0 307 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 SLC25A37Q9NYZ2 338 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 MED11Q9P086 117 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 SUCOQ9UBS9 1254 aaKnown RBP10.03□□□□□ -0.8
CHD3-216ENST00000573936 FBXL2Q9UKC9 423 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 ACAD8Q9UKU7 415 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 MKLN1Q9UL63 735 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 LIPGQ9Y5X9 500 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 OTOGQ6ZRI0 2925 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 A0A087WZY1 265 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 TRBV5-3A0A0A0MS03 114 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 C15orf38-AP3S2A0A0A6YYH1 394 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 NPIPA5A0A0B4J1W7 369 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 TRGV8A0A0C4DH27 118 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 SERINC4A6NH21 518 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 NPIPA2E9PIF3 369 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 NPIPA7E9PJI5 369 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 NPIPA3F8WFD2 350 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 LINC01387J3KSC0 135 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 ADAM10O14672 748 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 KIAA0513O60268 411 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 FCMRO60667 390 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 UGT2B17O75795 530 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 ACTL6AO96019 429 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 TPOP07202 933 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 HOXD4P09016 255 aaPredicted RBP10.02□□□□□ -0.81
CHD3-216ENST00000573936 NPIPA8P0DM63 369 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 BMP2P12643 396 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 GPX2P18283 190 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 HK1P19367 917 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 CA7P43166 264 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 P2RX1P51575 399 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 SUMO3P55854 103 aaPredicted RBP10.02□□□□□ -0.81
CHD3-216ENST00000573936 CHRNEQ04844 493 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 FUT5Q11128 374 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 SF3B4Q15427 424 aaKnown RBP eCLIP10.02□□□□□ -0.811e-6■■■□□ 17.6
CHD3-216ENST00000573936 EIPR1Q53HC9 387 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 WIPI1Q5MNZ9 446 aaPredicted RBP10.02□□□□□ -0.81
CHD3-216ENST00000573936 PDZK1Q5T2W1 519 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 PRAMEF8Q5VWM4 474 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 C1QL3Q5VWW1 255 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 PRAMEF7Q5VXH5 474 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 AAGABQ6PD74 315 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 FRRS1Q6ZNA5 592 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 FGD2Q7Z6J4 655 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 YRDCQ86U90 279 aaKnown RBP10.02□□□□□ -0.81
CHD3-216ENST00000573936 IFNEQ86WN2 208 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 CHERPQ8IWX8 916 aaKnown RBP10.02□□□□□ -0.81
CHD3-216ENST00000573936 MSRB3Q8IXL7 192 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 PM20D2Q8IYS1 436 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 ZNF614Q8N883 585 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 GATSQ8NAP1 163 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 ABTB1Q969K4 478 aaPredicted RBP10.02□□□□□ -0.81
CHD3-216ENST00000573936 C1GALT1C1Q96EU7 318 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 ANKRD27Q96NW4 1050 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 SH3GL1Q99961 368 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 CCDC106Q9BWC9 280 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 RTN4RQ9BZR6 473 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 MYLK2Q9H1R3 596 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 SLC6A15Q9H2J7 730 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 A4GALTQ9NPC4 353 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.02□□□□□ -0.81
CHD3-216ENST00000573936 SLAMF8Q9P0V8 285 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 ARMCX1Q9P291 453 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 SLC35A3Q9Y2D2 325 aa10.02□□□□□ -0.81
CHD3-216ENST00000573936 EXPH5Q8NEV8 1989 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms