RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RESP18Q5W5W9 173 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 THOC7Q6I9Y2 204 aaKnown RBP4.87□□□□□ -1.63
SF3B3-214ENST00000572365 DHRS7BQ6IAN0 325 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-214ENST00000572365 FAM122CQ6P4D5 195 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 C16orf87Q6PH81 154 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 CDHR3Q6ZTQ4 885 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 GLCCI1Q86VQ1 547 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 TMEM139Q8IV31 216 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF547Q8IVP9 402 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 GSDMBQ8TAX9 411 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 THAP6Q8TBB0 222 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 PIH1D2Q8WWB5 315 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 PSMF1Q92530 271 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 HAUS1Q96CS2 278 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 CDRT15Q96T59 188 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 DDOQ99489 341 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 NDNQ99608 321 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 SLCO5A1Q9H2Y9 848 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 KCNK15Q9H427 330 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 UCK1Q9HA47 277 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 CCDC177Q9NQR7 707 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-214ENST00000572365 TXLNGQ9NUQ3 528 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 IMP3Q9NV31 184 aaKnown RBP4.87□□□□□ -1.63
SF3B3-214ENST00000572365 COQ3Q9NZJ6 369 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 FBXL2Q9UKC9 423 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 CHKBQ9Y259 395 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF835Q9Y2P0 537 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 ROS1P08922 2347 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 MGAM2Q2M2H8 2515 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 ARHGAP21Q5T5U3 1957 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 TRAV17A0A0B4J275 112 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 OR5K3A6NET4 321 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 A8MUI8 341 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 OR2B3O76000 313 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 PGLSO95336 258 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 NQO1P15559 274 aaKnown RBP4.86□□□□□ -1.63
SF3B3-214ENST00000572365 IDSP22304 550 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 ATP5DP30049 168 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 CAPZA2P47755 286 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 OR1D4P47884 311 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 CSNK1DP48730 415 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 CLDN20P56880 219 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 RPL26P61254 145 aaKnown RBP4.86□□□□□ -1.63
SF3B3-214ENST00000572365 TUBA1BP68363 451 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 DCDP81605 110 aaKnown RBP4.86□□□□□ -1.63
SF3B3-214ENST00000572365 EEF1A2Q05639 463 aaKnown RBP4.86□□□□□ -1.63
SF3B3-214ENST00000572365 CUL1Q13616 776 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 NKAIN1Q4KMZ8 207 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 KRTCAP3Q53RY4 240 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 ODF2Q5BJF6 829 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF549Q6P9A3 640 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 TUBA1AQ71U36 451 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 NLRP9Q7RTR0 991 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 LDB1Q86U70 411 aaPredicted RBP4.86□□□□□ -1.63
SF3B3-214ENST00000572365 SPATA24Q86W54 205 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 GCSAMQ8N6F7 178 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 TC2NQ8N9U0 490 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 LMNTD1Q8N9Z9 388 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 ACVR1CQ8NER5 493 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 OR11G2Q8NGC1 345 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 OR10Q1Q8NGQ4 319 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 OR5R1Q8NH85 324 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 LILRB4Q8NHJ6 448 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 HMGCLL1Q8TB92 370 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 CCDC110Q8TBZ0 833 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 FAM172AQ8WUF8 416 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 TMEM158Q8WZ71 300 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 LPGAT1Q92604 370 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 PHF21BQ96EK2 531 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 SCRN2Q96FV2 425 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 CHMP6Q96FZ7 201 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 IP6K3Q96PC2 410 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 CSF3RQ99062 836 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 HGH1Q9BTY7 390 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 CCDC106Q9BWC9 280 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 SPATA16Q9BXB7 569 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 RAD21L1Q9H4I0 556 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 XKR8Q9H6D3 395 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 LRRC19Q9H756 370 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 DCLRE1BQ9H816 532 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 FANCEQ9HB96 536 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 STMN3Q9NZ72 180 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 RNF7Q9UBF6 113 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 KCNN3Q9UGI6 736 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 KLHL20Q9Y2M5 609 aa4.86□□□□□ -1.63
SF3B3-214ENST00000572365 BZW2Q9Y6E2 419 aaKnown RBP4.86□□□□□ -1.63
SF3B3-214ENST00000572365 CR1P17927 2039 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 A0A1W2PP11 408 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 ARHGAP42A6NI28 874 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 A8MXE2 369 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 BTN3A3O00478 584 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 NDUFS4O43181 175 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 PHF1O43189 567 aaPredicted RBP4.85□□□□□ -1.63
SF3B3-214ENST00000572365 IDH3BO43837 385 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 CDC40O60508 579 aaKnown RBP eCLIP4.85□□□□□ -1.63
SF3B3-214ENST00000572365 KLHL41O60662 606 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 CRLF1O75462 422 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 MTRF1O75570 445 aaKnown RBP4.85□□□□□ -1.63
SF3B3-214ENST00000572365 APOA4P06727 396 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 PFKFB1P16118 471 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms