RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 CD59P13987 128 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 STAT5AP42229 794 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 RAB15P59190 212 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 HOXC5Q00444 222 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 NNATQ16517 81 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 BORAQ6PGQ7 559 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 NAXDQ8IW45 347 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 LSMEM1Q8N8F7 131 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 ZNF321PQ8N8H1 164 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 B3GNT7Q8NFL0 401 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 BPIFB6Q8NFQ5 453 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 CNIH3Q8TBE1 160 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 CNOT9Q92600 299 aaKnown RBP17.93■□□□□ 0.46
RPAIN-210ENST00000571613 TP53INP1Q96A56 240 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 GAL3ST4Q96RP7 486 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 ZPBPQ9BS86 351 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 PRR14Q9BWN1 585 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 WWTR1Q9GZV5 400 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 SLC7A7Q9UM01 511 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 PPIEQ9UNP9 301 aaKnown RBP17.93■□□□□ 0.46
RPAIN-210ENST00000571613 RNF6Q9Y252 685 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 SNX5Q9Y5X3 404 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 CDX4O14627 284 aaPredicted RBP17.92■□□□□ 0.46
RPAIN-210ENST00000571613 CSTAP01040 98 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 SLC5A2P31639 672 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 NADK2Q4G0N4 442 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 KLHL26Q53HC5 615 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 SLX4IPQ5VYV7 408 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 MRPL14Q6P1L8 145 aaKnown RBP17.92■□□□□ 0.46
RPAIN-210ENST00000571613 LANCL3Q6ZV70 420 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 SATL1Q86VE3 508 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 CCDC71Q8IV32 467 aaPredicted RBP17.92■□□□□ 0.46
RPAIN-210ENST00000571613 C9orf40Q8IXQ3 194 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 MPP4Q96JB8 637 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 LPAR4Q99677 370 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 CTRCQ99895 268 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 CRB3Q9BUF7 120 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 SEMA4CQ9C0C4 833 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 POLR1BQ9H9Y6 1135 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 TMEM9BQ9NQ34 198 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 PLCXD1Q9NUJ7 323 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 SLC39A1Q9NY26 324 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 SELENONQ9NZV5 590 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 TMEM5Q9Y2B1 443 aa17.92■□□□□ 0.46
RPAIN-210ENST00000571613 KMT2EQ8IZD2 1858 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 C9J4A7 227 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 LINGO3P0C6S8 592 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 TBXA2RP21731 343 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 FPR3P25089 353 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 POU1F1P28069 291 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 HTR2AP28223 471 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 IL12BP29460 328 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 GSSP48637 474 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 GPR143P51810 404 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 LAIR2Q6ISS4 152 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 CASP12Q6UXS9 341 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 SHISA6Q6ZSJ9 500 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 RASSF6Q6ZTQ3 369 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 NKAIN4Q8IVV8 208 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 CDK20Q8IZL9 346 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 SLC34A3Q8N130 599 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 CCNL2Q96S94 520 aaPredicted RBP17.91■□□□□ 0.46
RPAIN-210ENST00000571613 SPSB2Q99619 263 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 TUBA1CQ9BQE3 449 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 TEX12Q9BXU0 123 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 PRRG3Q9BZD7 231 aa17.91■□□□□ 0.46
RPAIN-210ENST00000571613 SH3D21A4FU49 640 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 AGRPO00253 132 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 CHP2O43745 196 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 NGFRP08138 427 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 PRG2P13727 222 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 RBM34P42696 430 aaKnown RBP17.9■□□□□ 0.46
RPAIN-210ENST00000571613 OMPP47874 163 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 PNLIPRP2P54317 469 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 NRG3P56975 720 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 TMEM205Q6UW68 189 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 PRICKLE2Q7Z3G6 844 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 CPEB2Q7Z5Q1 589 aaKnown RBP17.9■□□□□ 0.46
RPAIN-210ENST00000571613 OR4C3Q8NH37 302 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 OR8K3Q8NH51 312 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 WDR36Q8NI36 951 aaKnown RBP17.9■□□□□ 0.46
RPAIN-210ENST00000571613 EFHD2Q96C19 240 aaPredicted RBP17.9■□□□□ 0.46
RPAIN-210ENST00000571613 DGCR14Q96DF8 476 aaKnown RBP17.9■□□□□ 0.46
RPAIN-210ENST00000571613 VMP1Q96GC9 406 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 Q96MT0 163 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 NODALQ96S42 347 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 DUSP21Q9H596 190 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 EXOSC3Q9NQT5 275 aaKnown RBP17.9■□□□□ 0.46
RPAIN-210ENST00000571613 RASSF1Q9NS23 344 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 FER1L5A0AVI2 2057 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 REM1O75628 298 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 THY1P04216 161 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 CCL4P13236 92 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 JUNBP17275 347 aaPredicted RBP17.9■□□□□ 0.46
RPAIN-210ENST00000571613 ACAA2P42765 397 aaKnown RBP17.9■□□□□ 0.46
RPAIN-210ENST00000571613 NR0B1P51843 470 aaKnown RBP17.9■□□□□ 0.46
RPAIN-210ENST00000571613 COPZ1P61923 177 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 DCAF12Q5T6F0 453 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 FAAH2Q6GMR7 532 aa17.9■□□□□ 0.46
RPAIN-210ENST00000571613 HSDL2Q6YN16 418 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms