RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 MEX3BQ6ZN04 569 aaKnown RBP12.59□□□□□ -0.39
RPAIN-209ENST00000571558 C16orf47Q6ZP98 133 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-209ENST00000571558 OLIG3Q7RTU3 272 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 OR52E4Q8NGH9 312 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 CA5BP1Q8WTZ4 195 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 WDR60Q8WVS4 1066 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 VKORC1Q9BQB6 163 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 ZNF350Q9GZX5 532 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 SAP130Q9H0E3 1048 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 LIN28AQ9H9Z2 209 aaKnown RBP12.59□□□□□ -0.39
RPAIN-209ENST00000571558 Q9N2J8 555 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 FBXO34Q9NWN3 711 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 MAGEL2Q9UJ55 1249 aa12.59□□□□□ -0.39
RPAIN-209ENST00000571558 CDK2AP1O14519 115 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 ZNF354AO60765 605 aaPredicted RBP12.58□□□□□ -0.4
RPAIN-209ENST00000571558 H6PDO95479 791 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 KDELR2P33947 212 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 NR0B1P51843 470 aaKnown RBP12.58□□□□□ -0.4
RPAIN-209ENST00000571558 CRISP3P54108 245 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 PSPHP78330 225 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 GNA13Q14344 377 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 CDSNQ15517 529 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.58□□□□□ -0.4
RPAIN-209ENST00000571558 ZNF766Q5HY98 468 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 CCNJQ5T5M9 372 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 HLA-DQA1Q5Y7H0 255 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 GLYATQ6IB77 296 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 FRRS1Q6ZNA5 592 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 LRRC74BQ6ZQY2 392 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 C16orf62Q7Z3J2 963 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 OR5L2Q8NGL0 311 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 HSPBAP1Q96EW2 488 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 RSPO3Q9BXY4 272 aaPredicted RBP12.58□□□□□ -0.4
RPAIN-209ENST00000571558 DEFB126Q9BYW3 111 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 SLC24A3Q9HC58 644 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 COQ3Q9NZJ6 369 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 MYOTQ9UBF9 498 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 TNFRSF10DQ9UBN6 386 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 CBLCQ9ULV8 474 aa12.58□□□□□ -0.4
RPAIN-209ENST00000571558 CACNA1CQ13936 2221 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 A0A0G2JPF8 293 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 TCRBV5S2A0A599 114 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 TMEM247A6NEH6 219 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 TMEM229AB2RXF0 380 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 HNRNPCL2B2RXH8 293 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 HNRNPCL3B7ZW38 293 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 GSTA4O15217 222 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 KIAA0513O60268 411 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 HNRNPCL4P0DMR1 293 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 CHRNEQ04844 493 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 CCNIQ14094 377 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 GPAT3Q53EU6 434 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 RPS26P11Q5JNZ5 115 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-209ENST00000571558 INTS11Q5TA45 600 aaKnown RBP12.57□□□□□ -0.4
RPAIN-209ENST00000571558 C1orf146Q5VVC0 180 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 TYW3Q6IPR3 259 aaKnown RBP12.57□□□□□ -0.4
RPAIN-209ENST00000571558 FIGNL1Q6PIW4 674 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 ZAR1Q86SH2 424 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 DHFR2Q86XF0 187 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 FIG4Q92562 907 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 RMND5BQ96G75 393 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-209ENST00000571558 DENND2DQ9H6A0 471 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-209ENST00000571558 POLE3Q9NRF9 147 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 CALML5Q9NZT1 146 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 ANGPT4Q9Y264 503 aa12.57□□□□□ -0.4
RPAIN-209ENST00000571558 A8MUI8 341 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 C5orf58C9J3I9 102 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 NPIPB9F8W1W9 429 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 MAN1A2O60476 641 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 TSPAN2O60636 221 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 STX11O75558 287 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 CIB2O75838 187 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 IL33O95760 270 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 F10P00742 488 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 ETS2P15036 469 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 IGFBP2P18065 325 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 ABCD3P28288 659 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 AQP1P29972 269 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 ACTR3P61158 418 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 ALDH6A1Q02252 535 aaKnown RBP12.56□□□□□ -0.4
RPAIN-209ENST00000571558 FLOT2Q14254 428 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 KPNB1Q14974 876 aaKnown RBP12.56□□□□□ -0.4
RPAIN-209ENST00000571558 DECR1Q16698 335 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 LYPD8Q6UX82 237 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 CYP2R1Q6VVX0 501 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 GALNT10Q86SR1 603 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 PATL1Q86TB9 770 aaKnown RBP12.56□□□□□ -0.4
RPAIN-209ENST00000571558 BBS10Q8TAM1 723 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 PMM1Q92871 262 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 TMBIM1Q969X1 311 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 TAMM41Q96BW9 452 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 ZG16BQ96DA0 208 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 ZNF354BQ96LW1 612 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 FOXC2Q99958 501 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 G6PC3Q9BUM1 346 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 CXXC4Q9H2H0 198 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 DCAF13Q9NV06 445 aaKnown RBP12.56□□□□□ -0.4
RPAIN-209ENST00000571558 KCNE5Q9UJ90 142 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 WDR45Q9Y484 360 aa12.56□□□□□ -0.4
RPAIN-209ENST00000571558 OR10H1Q9Y4A9 318 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms