RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 EIF3MQ7L2H7 374 aaKnown RBP11.09□□□□□ -0.63
SF3B3-208ENST00000567250 SERPINA11Q86U17 422 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 IFNEQ86WN2 208 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 TREML1Q86YW5 311 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 CMIPQ8IY22 773 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 TMCO5AQ8N6Q1 288 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 ANKFN1Q8N957 763 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 FADS6Q8N9I5 356 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 GATSQ8NAP1 163 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 C11orf65Q8NCR3 313 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 TOR1AIP2Q8NFQ8 470 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 DUSP19Q8WTR2 217 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 SLC38A5Q8WUX1 472 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 WDR60Q8WVS4 1066 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 GNRHR2Q96P88 292 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 SPATA5L1Q9BVQ7 753 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 OR2B2Q9GZK3 357 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 DEFB127Q9H1M4 99 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 SLC38A1Q9H2H9 487 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 ARMC7Q9H6L4 198 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 MTHFD2LQ9H903 347 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-208ENST00000567250 NANOGQ9H9S0 305 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-208ENST00000567250 NDE1Q9NXR1 346 aa11.09□□□□□ -0.63
SF3B3-208ENST00000567250 UBR5O95071 2799 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-208ENST00000567250 SVILO95425 2214 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 AGAP5A6NIR3 686 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 J3QKU1 62 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 AQP7O14520 342 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 HCRTR2O43614 444 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 EIF4E2O60573 245 aaKnown RBP11.08□□□□□ -0.64
SF3B3-208ENST00000567250 PDE9AO76083 593 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 CSTAP01040 98 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 C1QCP02747 245 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 THBS1P07996 1170 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 RFPL3SP0C7P2 107 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 UQCRBP14927 111 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 DPP4P27487 766 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 P2RX1P51575 399 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 CDK6Q00534 326 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 CHRNEQ04844 493 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 SCARB2Q14108 478 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 LARS2Q15031 903 aaKnown RBP11.08□□□□□ -0.64
SF3B3-208ENST00000567250 CD226Q15762 336 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 LIN52Q52LA3 116 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 INTS11Q5TA45 600 aaKnown RBP11.08□□□□□ -0.64
SF3B3-208ENST00000567250 OR5M10Q6IEU7 315 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 REEP3Q6NUK4 255 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 ERICH5Q6P6B1 374 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 APOOLQ6UXV4 268 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 TRILQ7L0X0 811 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 EID3Q8N140 333 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 HIPK4Q8NE63 616 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 FAM83FQ8NEG4 500 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-208ENST00000567250 OR2M3Q8NG83 312 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 OR14L1PQ8NHC6 308 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 B4GALNT2Q8NHY0 566 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 SARAFQ96BY9 339 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 ZNF607Q96SK3 696 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 HOPXQ9BPY8 73 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-208ENST00000567250 TREX2Q9BQ50 279 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-208ENST00000567250 ECSITQ9BQ95 431 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 SLC39A3Q9BRY0 314 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 IKZF5Q9H5V7 419 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 RUBCNLQ9H714 662 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 KAT8Q9H7Z6 458 aaKnown RBP11.08□□□□□ -0.64
SF3B3-208ENST00000567250 BCL2L10Q9HD36 194 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 TAGLN3Q9UI15 199 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 IFT52Q9Y366 437 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 MRPS18CQ9Y3D5 142 aaKnown RBP11.08□□□□□ -0.64
SF3B3-208ENST00000567250 L3MBTL1Q9Y468 752 aa11.08□□□□□ -0.64
SF3B3-208ENST00000567250 A0A087WZY1 265 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 A0A1B0GVC2 190 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 PRAMEF27A3QJZ7 478 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 PRRG2O14669 202 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 BCKDKO14874 412 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 ZIC2O95409 532 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-208ENST00000567250 CBX6O95503 412 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 NUDT14O95848 222 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 NUDT7P0C024 238 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 FREM3P0C091 2139 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 NID1P14543 1247 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 ETS2P15036 469 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 ZNF17P17021 662 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 RPS4Y1P22090 263 aaKnown RBP11.07□□□□□ -0.64
SF3B3-208ENST00000567250 PCGF2P35227 344 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 PTGS2P35354 604 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 CCR4P51679 360 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 ZNF117Q03924 483 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 IGFBP7Q16270 282 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 GLYR1Q49A26 553 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-208ENST00000567250 EIPR1Q53HC9 387 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 RAET1LQ5VY80 246 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 AAGABQ6PD74 315 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 NET1Q7Z628 596 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-208ENST00000567250 BHLHE22Q8NFJ8 381 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-208ENST00000567250 OR52P1PQ8NH57 321 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 OR10A6Q8NH74 314 aa11.07□□□□□ -0.64
SF3B3-208ENST00000567250 NFKBIDQ8NI38 313 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms