RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CD80P33681 288 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC1A2P43004 574 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 GYG1P46976 350 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 P2RY1P47900 373 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 UQCRFS1P47985 274 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 EFNB2P52799 333 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 DVL1P1P54792 670 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 MAP3K7CLP57077 242 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 PHEXP78562 749 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 RPL24P83731 157 aaKnown RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 GPR17Q13304 367 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF177Q13360 481 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 C1orf61Q13536 156 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 KIR2DS3Q14952 304 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 DAZAP2Q15038 168 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF74Q16587 644 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 FAM106AQ4KMX7 169 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 C10orf25Q5T742 122 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 NEPROQ6NW34 567 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 TTC23LQ6PF05 361 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 CCDC137Q6PK04 289 aaKnown RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ENPP6Q6UWR7 440 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 BTNL3Q6UXE8 466 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 TMEM184AQ6ZMB5 413 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 Q6ZPA2 131 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF788Q6ZQV5 615 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 FAM89BQ8N5H3 189 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 RBMXL3Q8N7X1 1067 aaKnown RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF441Q8N8Z8 693 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 OR5T3Q8NGG3 340 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 RPLP0P6Q8NHW5 317 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 FBXO25Q8TCJ0 367 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 CCDC12Q8WUD4 166 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 PDCD6IPQ8WUM4 868 aaKnown RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 RAB1CQ92928 201 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ITFG2Q969R8 447 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 RAB3CQ96E17 227 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 OMA1Q96E52 524 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ARL5BQ96KC2 179 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 CATSPER2Q96P56 530 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC6A7Q99884 636 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 KCNS3Q9BQ31 491 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 C19orf43Q9BQ61 176 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 TMEM121Q9BTD3 319 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 DUSP16Q9BY84 665 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 IL22Q9GZX6 179 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 RHBGQ9H310 441 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 CPVLQ9H3G5 476 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 BICC1Q9H694 974 aaKnown RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 PLEKHA3Q9HB20 300 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 LYRM4Q9HD34 91 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 MRPL39Q9NYK5 338 aaKnown RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ELF5Q9UKW6 265 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 POGZQ7Z3K3 1410 aa2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 ARHGEF17Q96PE2 2063 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-211ENST00000566550 TARBP1Q13395 1621 aaKnown RBP2.9□□□□□ -1.94
HERPUD1-211ENST00000566550 RPAP1Q9BWH6 1393 aaPredicted RBP2.9□□□□□ -1.94
HERPUD1-211ENST00000566550 EPRSP07814 1512 aaKnown RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 hCG_38984A0A1B0GV85 526 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 HHLA1C9JL84 531 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 NEDD8-MDP1E9PL57 170 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CYB561D2O14569 222 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF195O14628 629 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 POLR1CO15160 346 aaPredicted RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CLOCKO15516 846 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 PPIHO43447 177 aaKnown RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 SYNGR3O43761 229 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CDK2AP2O75956 126 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 C1QL1O75973 258 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 KRT36O76013 467 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 FGF19O95750 216 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 ECDO95905 644 aaPredicted RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 IGLV2-14P01704 120 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 P04436 131 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 RPLP0P05388 317 aaKnown RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 PLEKP08567 350 aaPredicted RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CCNB1P14635 433 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 HPGDP15428 266 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 XRCC1P18887 633 aaPredicted RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 PGCP20142 388 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 TNFRSF1BP20333 461 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 IMPDH1P20839 514 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CERS1P27544 350 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 GCAP28676 217 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 GPR4P46093 362 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 RFX2P48378 723 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 HLCSP50747 726 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 PSMD4P55036 377 aaKnown RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 YWHAGP61981 247 aaKnown RBP eCLIP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 YWHAEP62258 255 aaKnown RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CDR2Q01850 454 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 PAX5Q02548 391 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 SRSF1Q07955 248 aaKnown RBP eCLIP2.9□□□□□ -1.952e-9■■■■■ 29.8
HERPUD1-211ENST00000566550 RBBP4Q09028 425 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 CRMP1Q14194 572 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 EIF2B1Q14232 305 aaKnown RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC17A1Q14916 467 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 RBMS2Q15434 407 aaKnown RBP2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 HAGHQ16775 308 aa2.9□□□□□ -1.95
HERPUD1-211ENST00000566550 SNAI3Q3KNW1 292 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms