RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 GSPT2Q8IYD1 628 aaKnown RBP7.67□□□□□ -1.18
CAPN3-213ENST00000565173 GATSQ8NAP1 163 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 NUP43Q8NFH3 380 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 CEP70Q8NHQ1 597 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 FBXO30Q8TB52 745 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 ZBTB8AQ96BR9 441 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 ZBED6CLQ96FA7 236 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-213ENST00000565173 RNF145Q96MT1 663 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 CCT7Q99832 543 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 TMEM204Q9BSN7 226 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 BDH2Q9BUT1 245 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 GATA5Q9BWX5 397 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-213ENST00000565173 UBQLN4Q9NRR5 601 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 SIRT3Q9NTG7 399 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-213ENST00000565173 ACSS1Q9NUB1 689 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-213ENST00000565173 ZNF701Q9NV72 531 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-213ENST00000565173 STOML1Q9UBI4 398 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 EMC9Q9Y3B6 208 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 DNAJC15Q9Y5T4 150 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 DSCAMO60469 2012 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 ROS1P08922 2347 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 A0A1W2PQD3 144 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 AZIN1O14977 448 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 LSM1O15116 133 aaKnown RBP7.66□□□□□ -1.18
CAPN3-213ENST00000565173 RGS14O43566 566 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 CXCL13O43927 109 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 SLU7O95391 586 aaKnown RBP7.66□□□□□ -1.18
CAPN3-213ENST00000565173 CNOT4O95628 575 aaKnown RBP7.66□□□□□ -1.18
CAPN3-213ENST00000565173 FGF4P08620 206 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 LINC00032P0C843 101 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 PPP3CBP16298 524 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 PSMB1P20618 241 aaKnown RBP7.66□□□□□ -1.18
CAPN3-213ENST00000565173 LCN1P31025 176 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 PTH2RP49190 550 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 PCLAFQ15004 111 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 MLC1Q15049 377 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 VPS26BQ4G0F5 336 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 KLHL26Q53HC5 615 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 BEX5Q5H9J7 111 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 CCNJQ5T5M9 372 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 KANK2Q63ZY3 851 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 ZNF704Q6ZNC4 412 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-213ENST00000565173 PLEKHM3Q6ZWE6 761 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 TRABD2AQ86V40 505 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 MISPQ8IVT2 679 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 C10orf107Q8IVU9 208 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 OR6Y1Q8NGX8 325 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 OR2V1Q8NHB1 315 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 LILRB1Q8NHL6 650 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-213ENST00000565173 CLHC1Q8NHS4 586 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 OSTF1Q92882 214 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 ZNF524Q96C55 264 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 PPCDCQ96CD2 204 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 FAM120BQ96EK7 910 aaKnown RBP7.66□□□□□ -1.18
CAPN3-213ENST00000565173 OTUB1Q96FW1 271 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-213ENST00000565173 PLPPR2Q96GM1 343 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 SH3YL1Q96HL8 342 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-213ENST00000565173 MS4A4EQ96PG1 132 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 TSSK3Q96PN8 268 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 PRRG4Q9BZD6 226 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 OR10A4Q9H209 315 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 TMEM185BQ9H7F4 350 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 GLRX2Q9NS18 164 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 PAQR5Q9NXK6 330 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-213ENST00000565173 GIN1Q9NXP7 522 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 SH3BP4Q9P0V3 963 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 MCTS1Q9ULC4 181 aaKnown RBP7.66□□□□□ -1.18
CAPN3-213ENST00000565173 GPR52Q9Y2T5 361 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 PRR14LQ5THK1 2151 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 CSPG4Q6UVK1 2322 aa7.66□□□□□ -1.18
CAPN3-213ENST00000565173 FBN3Q75N90 2809 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 KIAA1324LA8MWY0 1029 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-213ENST00000565173 TMEM233B4DJY2 109 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 HS3ST1O14792 307 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 SMAD7O15105 426 aaKnown RBP7.65□□□□□ -1.18
CAPN3-213ENST00000565173 OIP5O43482 229 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 TRIM13O60858 407 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 GCM2O75603 506 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-213ENST00000565173 SOX30O94993 753 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 SYNGR4O95473 234 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 NTN1O95631 604 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 PLGP00747 810 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-213ENST00000565173 HMGN2P05204 90 aaKnown RBP7.65□□□□□ -1.18
CAPN3-213ENST00000565173 CHRNGP07510 517 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 BCKDHAP12694 445 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 KRT4P19013 534 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 EFNA1P20827 205 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-213ENST00000565173 AGTR1P30556 359 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 SERPINB4P48594 390 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 PRIM2P49643 509 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 CTBP2P56545 445 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 CARD18P57730 90 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 RPL38P63173 70 aaKnown RBP7.65□□□□□ -1.18
CAPN3-213ENST00000565173 ZNF117Q03924 483 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 ZNF844Q08AG5 666 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 SVEP1Q4LDE5 3571 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 HBMQ6B0K9 141 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 PPP4R4Q6NUP7 873 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 CBLN3Q6UW01 205 aa7.65□□□□□ -1.18
CAPN3-213ENST00000565173 BEND4Q6ZU67 534 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms