RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 NPAS1Q99742 590 aa16.64■□□□□ 0.25
NME3-204ENST00000563498 LRTM1Q9HBL6 345 aa16.64■□□□□ 0.25
NME3-204ENST00000563498 GP6Q9HCN6 339 aa16.64■□□□□ 0.25
NME3-204ENST00000563498 MID1IP1Q9NPA3 183 aa16.64■□□□□ 0.25
NME3-204ENST00000563498 EQTNQ9NQ60 294 aa16.64■□□□□ 0.25
NME3-204ENST00000563498 POLR3HQ9Y535 204 aaPredicted RBP16.64■□□□□ 0.25
NME3-204ENST00000563498 EXOC1LA0A1B0GW35 172 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 H3BQF6 201 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 UBFD1O14562 309 aaKnown RBP16.63■□□□□ 0.25
NME3-204ENST00000563498 CD5LO43866 347 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 IFNA2P01563 188 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 OPN1LWP04000 364 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 CD3EP07766 207 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 ADH6P28332 368 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 EIF1P41567 113 aaKnown RBP16.63■□□□□ 0.25
NME3-204ENST00000563498 CARD18P57730 90 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 NAA20P61599 178 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 HSPB3Q12988 150 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 RNPS1Q15287 305 aaKnown RBP16.63■□□□□ 0.25
NME3-204ENST00000563498 TMEM201Q5SNT2 666 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 SFRP5Q5T4F7 317 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 HMBOX1Q6NT76 420 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 FIGNL1Q6PIW4 674 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 DNM1P46Q6ZS02 220 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 ZNF551Q7Z340 670 aaPredicted RBP16.63■□□□□ 0.25
NME3-204ENST00000563498 HIPK1Q86Z02 1210 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 LILRA2Q8N149 483 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 OR6Y1Q8NGX8 325 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 SMAP2Q8WU79 429 aaPredicted RBP16.63■□□□□ 0.25
NME3-204ENST00000563498 GTPBP3Q969Y2 492 aaKnown RBP16.63■□□□□ 0.25
NME3-204ENST00000563498 KLHL15Q96M94 604 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 IQCGQ9H095 443 aaKnown RBP16.63■□□□□ 0.25
NME3-204ENST00000563498 SLCO5A1Q9H2Y9 848 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 TMEM185BQ9H7F4 350 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 UBQLN4Q9NRR5 601 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 FBXO34Q9NWN3 711 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 NTMQ9P121 344 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 KLHL13Q9P2N7 655 aa16.63■□□□□ 0.25
NME3-204ENST00000563498 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 CLOCKO15516 846 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 PDPK1O15530 556 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 GSTA1P08263 222 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 ELK4P28324 431 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 ECHS1P30084 290 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 GPC1P35052 558 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 P2RY6Q15077 328 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 TAB1Q15750 504 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 ZNF239Q16600 458 aaKnown RBP16.62■□□□□ 0.25
NME3-204ENST00000563498 ZNF672Q499Z4 452 aaPredicted RBP16.62■□□□□ 0.25
NME3-204ENST00000563498 TFAP2EQ6VUC0 442 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 POC1BQ8TC44 478 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 NANOS1Q8WY41 292 aaKnown RBP16.62■□□□□ 0.25
NME3-204ENST00000563498 CPNE4Q96A23 557 aaPredicted RBP16.62■□□□□ 0.25
NME3-204ENST00000563498 CCDC126Q96EE4 140 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 GIMAP5Q96F15 307 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 REXO5Q96IC2 774 aaKnown RBP16.62■□□□□ 0.25
NME3-204ENST00000563498 TIGARQ9NQ88 270 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 RRAGDQ9NQL2 400 aaPredicted RBP16.62■□□□□ 0.25
NME3-204ENST00000563498 LIPT1Q9Y234 373 aa16.62■□□□□ 0.25
NME3-204ENST00000563498 MAGED1Q9Y5V3 778 aaPredicted RBP16.62■□□□□ 0.25
NME3-204ENST00000563498 PRR14LQ5THK1 2151 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 A0A1W2PQD3 144 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 RNF212BA8MTL3 300 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 KCNK2O95069 426 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 HSPA4LO95757 839 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 FESP07332 822 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 LINGO3P0C6S8 592 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 HPGDP15428 266 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 IL32P24001 234 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 GCAP28676 217 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 ALKBH2Q6NS38 261 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 ZCCHC12Q6PEW1 402 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 GATSQ8NAP1 163 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 ZFP28Q8NHY6 868 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 ACMSDQ8TDX5 336 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 ABHD3Q8WU67 409 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 IFT81Q8WYA0 676 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 ROBO4Q8WZ75 1007 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 ANP32BQ92688 251 aaKnown RBP16.61■□□□□ 0.25
NME3-204ENST00000563498 EGLN2Q96KS0 407 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 MS4A4EQ96PG1 132 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 POTEKPQ9BYX7 375 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 GRIP2Q9C0E4 1043 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 CR1P17927 2039 aa16.61■□□□□ 0.25
NME3-204ENST00000563498 ABCA1O95477 2261 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 A0A1W2PP18 115 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 GJE1A6NN92 205 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 NPIPB8E9PQR5 432 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 SCDO00767 359 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 TBX19O60806 448 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 IGHV4-39P01824 125 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 ABHD2P08910 425 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 ACP2P11117 423 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 PRPH2P23942 346 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 ACVR1BP36896 505 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 CDKN1AP38936 164 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 SERPINB4P48594 390 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 MANFP55145 182 aaKnown RBP16.6■□□□□ 0.25
NME3-204ENST00000563498 KIAA0040Q15053 153 aa16.6■□□□□ 0.25
NME3-204ENST00000563498 PGGHGQ32M88 737 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms