RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PALMO75781 387 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 HOXD4P09016 255 aaPredicted RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 HOXB7P09629 217 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 UMPSP11172 480 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 ZNF44P15621 663 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 ATP5A1P25705 553 aaKnown RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 LMO2P25791 158 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 PPT1P50897 306 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 IST1P53990 364 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 SLC8A3P57103 927 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 LMO4P61968 165 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 OTUD4Q01804 1114 aaKnown RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 BDH1Q02338 343 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 MAP2K1Q02750 393 aaPredicted RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 FCHO2Q0JRZ9 810 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 ST3GAL3Q11203 375 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 IL18R1Q13478 541 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 MXD4Q14582 209 aaPredicted RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 PDK3Q15120 406 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 CCL14Q16627 93 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 PCK2Q16822 640 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 TATDN3Q17R31 274 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 PHYHD1Q5SRE7 291 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 TMEM225Q6GV28 225 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 OR8G2PQ6IF36 304 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 TMEM184AQ6ZMB5 413 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 STOX1Q6ZVD7 989 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 EFL1Q7Z2Z2 1120 aaKnown RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 ANKRD37Q7Z713 158 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 NBPF5PQ86XG9 351 aaPredicted RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 ZNF683Q8IZ20 524 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 LYG1Q8N1E2 194 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 C4orf32Q8N8J7 132 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 BHLHE23Q8NDY6 225 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 OR5D13Q8NGL4 314 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 TRUB1Q8WWH5 349 aaKnown RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 RLN3Q8WXF3 142 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 FAM3CQ92520 227 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 MYLPFQ96A32 169 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 PELI1Q96FA3 418 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 PIWIL1Q96J94 861 aaKnown RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 C12orf66Q96MD2 445 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 PSMB7Q99436 277 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 SPATA16Q9BXB7 569 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 CRNKL1Q9BZJ0 848 aaKnown RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 APMAPQ9HDC9 416 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 TIGARQ9NQ88 270 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 MRPL39Q9NYK5 338 aaKnown RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 RABL2AQ9UBK7 228 aaPredicted RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 TP53BP1Q12888 1972 aaPredicted RBP2.57□□□□□ -2
SHCBP1-202ENST00000563219 METP08581 1390 aa2.57□□□□□ -2
SHCBP1-202ENST00000563219 TRAV9-2A0A087WT02 112 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 A0A1B0GVL5 298 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 LRP5LA4QPB2 252 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 FAM47DPA6NHR8 397 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 OR6C65A6NJZ3 312 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 ACOD1A6NK06 481 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 FOXI3A8MTJ6 420 aaPredicted RBP2.56□□□□□ -2
SHCBP1-202ENST00000563219 ZNF487B1APH4 448 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 SAP18O00422 153 aaKnown RBP2.56□□□□□ -2
SHCBP1-202ENST00000563219 TM9SF1O15321 606 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 TPST2O60704 377 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 N4BP1O75113 896 aaKnown RBP2.56□□□□□ -2
SHCBP1-202ENST00000563219 IGHV3-9P01782 118 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 PVRP15151 417 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 ACADSP16219 412 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 NCF2P19878 526 aaPredicted RBP2.56□□□□□ -2
SHCBP1-202ENST00000563219 GATA2P23769 480 aaPredicted RBP2.56□□□□□ -2
SHCBP1-202ENST00000563219 MAGEA8P43361 318 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 RPL8P62917 257 aaKnown RBP2.56□□□□□ -2
SHCBP1-202ENST00000563219 PUDPQ08623 228 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 ELAVL3Q14576 367 aaKnown RBP2.56□□□□□ -2
SHCBP1-202ENST00000563219 SLC22A6Q4U2R8 563 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 TP53I3Q53FA7 332 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 TCTEX1D4Q5JR98 221 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 PDZK1Q5T2W1 519 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 C9orf66Q5T8R8 295 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 SEL1L3Q68CR1 1132 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 ZNF57Q68EA5 555 aaPredicted RBP2.56□□□□□ -2
SHCBP1-202ENST00000563219 ZYG11AQ6WRX3 759 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 SLC22A18ASQ8N1D0 253 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 BPIFB2Q8N4F0 458 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 POM121L12Q8N7R1 296 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 ATP6V0D2Q8N8Y2 350 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 CSNK1G2-AS1Q8NCQ2 148 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 OR6T1Q8NGN1 323 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 PIGCQ92535 297 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 FOXN4Q96NZ1 517 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 TGM7Q96PF1 710 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 MCCC1Q96RQ3 725 aaPredicted RBP2.56□□□□□ -2
SHCBP1-202ENST00000563219 SLC6A7Q99884 636 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 TM2D1Q9BX74 207 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 METTL7AQ9H8H3 244 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 UFSP2Q9NUQ7 469 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 PAK1IP1Q9NWT1 392 aaPredicted RBP2.56□□□□□ -2
SHCBP1-202ENST00000563219 NMRK1Q9NWW6 199 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 HYPKQ9NX55 129 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 ELOVL2Q9NXB9 296 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 IL36GQ9NZH8 169 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 DHRS4-AS1Q9P1J3 65 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms