RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 CHRNA9Q9UGM1 479 aa4.03□□□□□ -1.76
LINC00557-201ENST00000563184 XPO7Q9UIA9 1087 aaKnown RBP4.03□□□□□ -1.76
LINC00557-201ENST00000563184 KLHL21Q9UJP4 597 aa4.03□□□□□ -1.76
LINC00557-201ENST00000563184 RAI1Q7Z5J4 1906 aaPredicted RBP4.02□□□□□ -1.77
LINC00557-201ENST00000563184 PPIAL4CA0A0B4J2A2 164 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 MAPK13O15264 365 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 PGK1P00558 417 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 ASNSP08243 561 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 PPIAL4GP0DN37 164 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 PRKAR2BP31323 418 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 RPL32P62910 135 aaKnown RBP4.02□□□□□ -1.77
LINC00557-201ENST00000563184 DNAJC21Q5F1R6 531 aaKnown RBP4.02□□□□□ -1.77
LINC00557-201ENST00000563184 NCR3LG1Q68D85 454 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 TMEM17Q86X19 198 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 C11orf53Q8IXP5 236 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 TRUB1Q8WWH5 349 aaKnown RBP4.02□□□□□ -1.77
LINC00557-201ENST00000563184 BADQ92934 168 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 SLC25A38Q96DW6 304 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 DTNBP1Q96EV8 351 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 RIMS3Q9UJD0 308 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 ISY1Q9ULR0 285 aaKnown RBP4.02□□□□□ -1.77
LINC00557-201ENST00000563184 FLVCR1Q9Y5Y0 555 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 SPACA6W5XKT8 324 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 ANKRD30BQ9BXX2 1392 aa4.02□□□□□ -1.77
LINC00557-201ENST00000563184 CHD4Q14839 1912 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 GPX5O75715 221 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 UFL1O94874 794 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 F10P00742 488 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 IGHV3-23P01764 117 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 TPSB2P20231 275 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 NUCB2P80303 420 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 NDPQ00604 133 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 TPSAB1Q15661 275 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 USH1GQ495M9 461 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 PAGE2BQ5JRK9 111 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 ACSM5Q6NUN0 579 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 CXCL17Q6UXB2 119 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 OR10T2Q8NGX3 314 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 OSTF1Q92882 214 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 CNOT6LQ96LI5 555 aaKnown RBP4.01□□□□□ -1.77
LINC00557-201ENST00000563184 TSGA13Q96PP4 275 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 CAB39LQ9H9S4 337 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 PAK1IP1Q9NWT1 392 aaPredicted RBP4.01□□□□□ -1.77
LINC00557-201ENST00000563184 TMEM9Q9P0T7 183 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 LAMP5Q9UJQ1 280 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 GSTK1Q9Y2Q3 226 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 ATP10DQ9P241 1426 aa4.01□□□□□ -1.77
LINC00557-201ENST00000563184 HSFX4A0A1B0GTS1 333 aaPredicted RBP4□□□□□ -1.77
LINC00557-201ENST00000563184 HSFX3A0A1B0GWH4 333 aaPredicted RBP4□□□□□ -1.77
LINC00557-201ENST00000563184 EPOPA6NHQ4 379 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 OR6C65A6NJZ3 312 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 SERF1AO75920 110 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 CABYRO75952 493 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 GUCA1CO95843 209 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 CCDC166P0CW27 439 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 CLUP10909 449 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 KRT13P13646 458 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 TBXA2RP21731 343 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 DRD5P21918 477 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 HPDP32754 393 aaPredicted RBP4□□□□□ -1.77
LINC00557-201ENST00000563184 MRPS11P82912 194 aaKnown RBP4□□□□□ -1.77
LINC00557-201ENST00000563184 EWSR1Q01844 656 aaKnown RBP eCLIP4□□□□□ -1.77
LINC00557-201ENST00000563184 CNTN2Q02246 1040 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 KLHL30Q0D2K2 578 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 ELP6Q0PNE2 266 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 LAGE3Q14657 143 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 ISXQ2M1V0 245 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 ZNF658Q5TYW1 1059 aaPredicted RBP4□□□□□ -1.77
LINC00557-201ENST00000563184 CEND1Q8N111 149 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 ZNF564Q8TBZ8 553 aaPredicted RBP4□□□□□ -1.77
LINC00557-201ENST00000563184 IL1F10Q8WWZ1 152 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 HAVCR1Q96D42 359 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 CITED1Q99966 193 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 DUSP16Q9BY84 665 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 YTHDF1Q9BYJ9 559 aaKnown RBP4□□□□□ -1.77
LINC00557-201ENST00000563184 PPDPFQ9H3Y8 114 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 WRAP73Q9P2S5 460 aaPredicted RBP4□□□□□ -1.77
LINC00557-201ENST00000563184 PDE10AQ9Y233 779 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 PPIAL4AQ9Y536 164 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 AP1M2Q9Y6Q5 423 aa4□□□□□ -1.77
LINC00557-201ENST00000563184 LOC100131303A0A0U1RQF7 123 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 ZFP92A6NM28 416 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 E7ENQ6 273 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 H3BMQ9 156 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 OR7A17O14581 309 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 TNFSF11O14788 317 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 OR1F1O43749 312 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 PEX11AO75192 247 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 TM7SF2O76062 418 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 MFN2O95140 757 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 KRT8P05787 483 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 STSP08842 583 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 EPB41P11171 864 aaKnown RBP3.99□□□□□ -1.77
LINC00557-201ENST00000563184 CPN1P15169 458 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 DESP17661 470 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 NT5EP21589 574 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 PAX7P23759 505 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 PSMA2P25787 234 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 ADORA2BP29275 332 aa3.99□□□□□ -1.77
LINC00557-201ENST00000563184 CA8P35219 290 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms