RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TRBV7-9A0A0J9YWB2 115 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 LRIT2A6NDA9 550 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 CCDC69A6NI79 296 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 TRIM64CA6NLI5 447 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 NPIPA2E9PIF3 369 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 PDLIM1O00151 329 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 NDC80O14777 642 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 NUDT21O43809 227 aaKnown RBP2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 HOXB7P09629 217 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 IDSP22304 550 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 TMOD1P28289 359 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 CNN1P51911 297 aaKnown RBP2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 NLRP11P59045 1033 aaKnown RBP2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 IL9RQ01113 521 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 UBXN1Q04323 297 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 C2orf76Q3KRA6 126 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 LGSNQ5TDP6 509 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 PRR5LQ6MZQ0 368 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 ZNF530Q6P9A1 599 aaPredicted RBP2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 PEX5LQ8IYB4 626 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 OTUD6BQ8N6M0 293 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 ANKRD20A12PQ8NF67 263 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 OR2L5Q8NG80 312 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 TAF4BQ92750 862 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 TMEM45BQ96B21 275 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 DEFB118Q96PH6 123 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 HCAR1Q9BXC0 346 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 TEX13AQ9BXU3 409 aaPredicted RBP2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 NLNQ9BYT8 704 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 XPO4Q9C0E2 1151 aaKnown RBP2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 FAM124BQ9H5Z6 455 aaPredicted RBP2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 KCNMB3Q9NPA1 279 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 MIEF1Q9NQG6 463 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 MIOXQ9UGB7 285 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 SLC2A6Q9UGQ3 507 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 ABCG2Q9UNQ0 655 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 DHRS7Q9Y394 339 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 KIF3AQ9Y496 699 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 FLVCR1Q9Y5Y0 555 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 SPEF2Q9C093 1822 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 THSD7BQ9C0I4 1608 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 SYNRGQ9UMZ2 1314 aa2.16□□□□□ -2.06
HDGFL3-202ENST00000562702 ZSWIM8A7E2V4 1837 aa2.15□□□□□ -2.06
HDGFL3-202ENST00000562702 CNTNAP1P78357 1384 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 PLEKHG2Q9H7P9 1386 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 IGLV8-61A0A075B6I0 122 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 TRBV2A0A0J9YWF9 115 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 MACROD2A1Z1Q3 448 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 ZFP92A6NM28 416 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 TLR4O00206 839 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 KINO60870 393 aaKnown RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 LRP3O75074 770 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 SERF1AO75920 110 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 PNPP00491 289 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 HLA-DPA1P20036 260 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 CASQ1P31415 396 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 IL2RGP31785 369 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 HPDP32754 393 aaPredicted RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 PRPHP41219 470 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 MAGEA4P43358 317 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 NT5C2P49902 561 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 CCL11P51671 97 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 SGSHP51688 502 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 SH3BGRP55822 239 aaPredicted RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 NOP14P78316 857 aaKnown RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 RPA4Q13156 261 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 GLYR1Q49A26 553 aaPredicted RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 CMPK2Q5EBM0 449 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 MEDAGQ5VYS4 303 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 CST9Q5W186 159 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 DLEU7Q6UYE1 221 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 CATSPER4Q7RTX7 472 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 GPBP1Q86WP2 473 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 ZNF677Q86XU0 584 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 GPR65Q8IYL9 337 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 MCOLN2Q8IZK6 566 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 SFRP1Q8N474 314 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 OR4F17Q8NGA8 305 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 ZNF564Q8TBZ8 553 aaPredicted RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 U2AF1L4Q8WU68 220 aaKnown RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 DLX4Q92988 240 aaPredicted RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 NUS1Q96E22 293 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 C11orf24Q96F05 449 aaPredicted RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 DTD2Q96FN9 168 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 OR4F4Q96R69 305 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 SDHCQ99643 169 aaPredicted RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 C19orf24Q9BVV8 132 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 DDX47Q9H0S4 455 aaKnown RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 ALG9Q9H6U8 611 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 MID1IP1Q9NPA3 183 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 EXOSC3Q9NQT5 275 aaKnown RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 HOMER3Q9NSC5 361 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 STARD5Q9NSY2 213 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 TMEM9Q9P0T7 183 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 HMG20BQ9P0W2 317 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 LHX3Q9UBR4 397 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 FAM153AQ9UHL3 310 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 TRMT6Q9UJA5 497 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms