RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 PHOSPHO1Q8TCT1 267 aa16.09■□□□□ 0.17
CMTM3-204ENST00000562357 SLC35G5Q96KT7 338 aa16.09■□□□□ 0.17
CMTM3-204ENST00000562357 RBM24Q9BX46 236 aaKnown RBP16.09■□□□□ 0.17
CMTM3-204ENST00000562357 PINK1Q9BXM7 581 aa16.09■□□□□ 0.17
CMTM3-204ENST00000562357 MEAF6Q9HAF1 191 aa16.09■□□□□ 0.17
CMTM3-204ENST00000562357 PNPOQ9NVS9 261 aa16.09■□□□□ 0.17
CMTM3-204ENST00000562357 ITGB1BP2Q9UKP3 347 aa16.09■□□□□ 0.17
CMTM3-204ENST00000562357 ZNF175Q9Y473 711 aa16.09■□□□□ 0.17
CMTM3-204ENST00000562357 LRBAP50851 2863 aa16.09■□□□□ 0.17
CMTM3-204ENST00000562357 SLCO1B7G3V0H7 640 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 NUDT14O95848 222 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 AK1P00568 194 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 SLC18A1P54219 525 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 SNTB1Q13884 538 aaKnown RBP16.08■□□□□ 0.16
CMTM3-204ENST00000562357 FGFBP1Q14512 234 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 FBXW10Q5XX13 1052 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 PPP4R4Q6NUP7 873 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 LUZP2Q86TE4 346 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 CLECL1Q8IZS7 167 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 CNEP1R1Q8N9A8 125 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 RAB3IL1Q8TBN0 382 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 NUDT8Q8WV74 236 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 TESCQ96BS2 214 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 OR7D2Q96RA2 312 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 ZBTB18Q99592 522 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 PRRG4Q9BZD6 226 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 MED17Q9NVC6 651 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 EXD2Q9NVH0 621 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 FBXO34Q9NWN3 711 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 PAQR5Q9NXK6 330 aaPredicted RBP16.08■□□□□ 0.16
CMTM3-204ENST00000562357 CRIM1Q9NZV1 1036 aa16.08■□□□□ 0.16
CMTM3-204ENST00000562357 ANKHD1Q8IWZ3 2542 aaKnown RBP16.07■□□□□ 0.16
CMTM3-204ENST00000562357 PRSS51A0A1B0GVH4 220 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 E9PBE3 544 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 GTPBP1O00178 669 aaKnown RBP16.07■□□□□ 0.16
CMTM3-204ENST00000562357 HDAC3O15379 428 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 CPSF4O95639 269 aaKnown RBP16.07■□□□□ 0.16
CMTM3-204ENST00000562357 TGM6O95932 706 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 AGR2O95994 175 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 MATN1P21941 496 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 S100A3P33764 101 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 EIF1P41567 113 aaKnown RBP16.07■□□□□ 0.16
CMTM3-204ENST00000562357 ATP12AP54707 1039 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 CLDN20P56880 219 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 WDR4P57081 412 aaKnown RBP16.07■□□□□ 0.16
CMTM3-204ENST00000562357 OCRLQ01968 901 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 BEND6Q5SZJ8 279 aaPredicted RBP16.07■□□□□ 0.16
CMTM3-204ENST00000562357 PDSS1Q5T2R2 415 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 ATAD3BQ5T9A4 648 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 OGFOD2Q6N063 350 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 PLXDC2Q6UX71 529 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 C16orf62Q7Z3J2 963 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 C6orf120Q7Z4R8 191 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 SPATA19Q7Z5L4 167 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 GTPBP8Q8N3Z3 284 aaPredicted RBP16.07■□□□□ 0.16
CMTM3-204ENST00000562357 DNAJB12Q9NXW2 375 aaKnown RBP16.07■□□□□ 0.16
CMTM3-204ENST00000562357 JKAMPQ9P055 326 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 EDARQ9UNE0 448 aa16.07■□□□□ 0.16
CMTM3-204ENST00000562357 FBN2P35556 2912 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 A0A1W2PNV4 684 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 C7orf72A4D263 438 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 EIF1AYO14602 144 aaKnown RBP16.06■□□□□ 0.16
CMTM3-204ENST00000562357 MSTNO14793 375 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 SMNDC1O75940 238 aaKnown RBP eCLIP16.06■□□□□ 0.16
CMTM3-204ENST00000562357 CHI3L1P36222 383 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-204ENST00000562357 CPOXP36551 454 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 EIF1AXP47813 144 aaKnown RBP16.06■□□□□ 0.16
CMTM3-204ENST00000562357 SUMO3P55854 103 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-204ENST00000562357 CLDN15P56746 228 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 RPS26P62854 115 aaKnown RBP16.06■□□□□ 0.16
CMTM3-204ENST00000562357 PON3Q15166 354 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 CD226Q15762 336 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 TMEM44Q2T9K0 475 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 ANKRD46Q86W74 232 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 METTL25Q8N6Q8 603 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 OR5D16Q8NGK9 328 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 POLDIP3Q9BY77 421 aaKnown RBP16.06■□□□□ 0.16
CMTM3-204ENST00000562357 MANSC1Q9H8J5 431 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 TMBIM4Q9HC24 238 aa16.06■□□□□ 0.16
CMTM3-204ENST00000562357 MARCOQ9UEW3 520 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-204ENST00000562357 MCTS1Q9ULC4 181 aaKnown RBP16.06■□□□□ 0.16
CMTM3-204ENST00000562357 NPIPA5A0A0B4J1W7 369 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 SHISA8B8ZZ34 492 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 NPIPA7E9PJI5 369 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 H0YC42 278 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 SNNO75324 88 aaPredicted RBP16.05■□□□□ 0.16
CMTM3-204ENST00000562357 CTAG2O75638 210 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 SYNGR4O95473 234 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 PLGP00747 810 aaPredicted RBP16.05■□□□□ 0.16
CMTM3-204ENST00000562357 NPIPA8P0DM63 369 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 KITP10721 976 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 UQCRC2P22695 453 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 SUCLG1P53597 346 aaKnown RBP16.05■□□□□ 0.16
CMTM3-204ENST00000562357 TPD52P55327 224 aaPredicted RBP16.05■□□□□ 0.16
CMTM3-204ENST00000562357 HPCAP84074 193 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 PLPPR5Q32ZL2 321 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 FAM174BQ3ZCQ3 159 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 SPANXN4Q5MJ08 99 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 NXNQ6DKJ4 435 aa16.05■□□□□ 0.16
CMTM3-204ENST00000562357 TMCO5AQ8N6Q1 288 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms